| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2944 |
|---|
| Symbol | |
|---|
| ID | 4006808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 91074 |
|---|
| End bp | 92027 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637949765 |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase |
|---|
| Protein accession | YP_552401 |
|---|
| Protein GI | 91777193 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.245088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCAAA GCTTTTATCG ACGGCAGCAG GAGAGCGGCG TGGACAAGGC AGTGATAGGC
GTAGTTGGCA CGGGATTGAT GGGCGTCGGC ATTGCGACGC AAAGCGCATT GCACGGACAC
AGAACGATCG TCCATGACGT GGATTCGGCG CGTCTGGCGA GCGTCGCGTC GAAAGCGCAA
GCCGTGCTCG ACGAACTGAT CGACGCCGGG CGTATCGACC GGGCGGCGAG CGAGGCGGCG
CTGGCTCGCA TCGAAACCCA TGCACAACTC GACATGATGG CGTCGGCGAA ATTCGTGATC
GAGGCGATTC CCGAGGTACT CGAACTGAAG CATCGCCTGT ATGCGGCGCT GACCGGGTTG
CTGGCTGACG ACGCGATTCT CGCGAGCAAC ACCAGCGGCT TCCCGCCCGA TCAACTGGTC
GCGCCGTTGC GCGCGAAAGA GCGCTTCGTG ATCGCGCATT TCTGGAACCC GCCGCATATG
ATTCCGCTCG TCGAAGTCGT GCCGGGCACG GCGACCGCGC CGGAAGTGAC GCAGCAGAGC
GCCGCGTTGA TGAGCGCGAT CGGCATGGAG CCGGTCGTGC TGGCGAAAGC GATTCCGGGT
TTCGTCGGCA ACCGGTTGCA GTTCGCGGTA CTGCGCGAGG CGTTGAATAT CGTCCGCTCC
GGCGCGGCGA CGCCCGAGGT GGTCGATCGC GTGATGAAGG CGTCGCTCGG CCGTCGCTGG
GGGATCGTCG GGCCGTTCGA GGGCGCGGAC ATGGGCGGCC TCGATACCTT CCTCGATATC
TCCTCGCATC TGATGCCGGA ACTGGCCAAA GACGAAGGCG TGCTCGACCT GTTGCGCGCG
CAGGTCGATG CGGGGCGCGT CGGCGTGCGC AGCGGCGCCG GCTTTTACGA ATGGGACGAT
GCGCATCTGG CGCAGGTGAA GGAAGGGCGC CGGCGCGTGA TCAGCCGCGG TTGA
|
|---|
| Protein sequence | MLQSFYRRQQ ESGVDKAVIG VVGTGLMGVG IATQSALHGH RTIVHDVDSA RLASVASKAQ
AVLDELIDAG RIDRAASEAA LARIETHAQL DMMASAKFVI EAIPEVLELK HRLYAALTGL
LADDAILASN TSGFPPDQLV APLRAKERFV IAHFWNPPHM IPLVEVVPGT ATAPEVTQQS
AALMSAIGME PVVLAKAIPG FVGNRLQFAV LREALNIVRS GAATPEVVDR VMKASLGRRW
GIVGPFEGAD MGGLDTFLDI SSHLMPELAK DEGVLDLLRA QVDAGRVGVR SGAGFYEWDD
AHLAQVKEGR RRVISRG
|
|---|
| |