Gene Bxe_B2926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B2926 
Symbol 
ID4006826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp115605 
End bp116441 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content67% 
IMG OID637949783 
Productputative transglycolase 
Protein accessionYP_552419 
Protein GI91777211 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGTG GCGTTAAAGG CGGACTGGCT GTGCTGGCAG GTGCCGTGGC AACGCGGTAT 
TGCATGGCCT CGGTGCGGAC ACTGCTGCCC GGCGTCCTGA TCGCGACAAG TGCCTATGTA
TCGCTCGACG CTCGGGCCGC CGACGCCACC CATGCACGCC AACGCCGTTC GCGAGGCGTG
GTCATGATGA TTGGGGGAAT GACGAGCGGT GGTGATACCG CCGTGCTGCC GGCGCGCGCG
GCGCCGGTGG CGCCTCTTGC GGCAGCCGGC GACGCCGGCC GGCAGTCCGT CGTGATCCAG
TCGGGCGGCC TGGCATTGAA CGACGTGGTG CGGCAAACGT CCGCCTCGGT CGCATCGCGT
GTCATGGCGC TCTCGCCGAT CATCAACGAG GCCGCCCGCG TCGCCGATGT GGACAGCGCG
CTGCTGATGG CGGTGATCGA TGTGGAGTCC GGAGGCAATC CGCAAGCCGT GTCGCCCAAA
GGCGCGACCG GCCTCATGCA GTTGATGCCC GACACGGGTG CGCGGCACGG CGCGTCCGAT
CTGTTCGATC CGCGCCAGAA CGTCGCGGCG GGCGCGCGCT ATCTGAAAGC GCTCATGCGC
CAGTTCGGCG GGCTTCCGCT TGCTCTCGCG GCCTATAACG CCGGCGAAGG TGCCGTCCAG
AAATACGGTG GTCAGATACC GCCGTATGCG GAAACCCTGA ACTATGTACC CAAGGTCATC
GCGCGATACC GGTGGTATCG GGATGCAGCT TCTTTCCCGG CTACGGCGTC GGTGCAAGCA
GTTCCGAACG GCGTCCACGA TCGGTTTCTG CTAGTCGGCT CCGGCGGCGT GGACTGA
 
Protein sequence
MSRGVKGGLA VLAGAVATRY CMASVRTLLP GVLIATSAYV SLDARAADAT HARQRRSRGV 
VMMIGGMTSG GDTAVLPARA APVAPLAAAG DAGRQSVVIQ SGGLALNDVV RQTSASVASR
VMALSPIINE AARVADVDSA LLMAVIDVES GGNPQAVSPK GATGLMQLMP DTGARHGASD
LFDPRQNVAA GARYLKALMR QFGGLPLALA AYNAGEGAVQ KYGGQIPPYA ETLNYVPKVI
ARYRWYRDAA SFPATASVQA VPNGVHDRFL LVGSGGVD