| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2827 |
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| Symbol | |
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| ID | 4006574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 235687 |
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| End bp | 237594 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637949882 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_552518 |
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| Protein GI | 91777310 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGACT TGCTGAAAAC CATTGACGAC CCGGCGGCAC TGCGCCGCCT CGATCGCCGC
CAATTGCAAC CGCTTGCCGA CGAGTTGCGT GCCTTTGTGC TCGACAGCGT ATCGCAGACG
GGCGGCCATC TTTCGTCCAA CCTCGGCACA GTCGAGTTGA CCATTGCGCT GCATTATGTG
TTCGACACGC CGCATGACCG GATCGTCTGG GACGTCGGCC ATCAAACGTA TCCGCACAAG
ATCCTGACGG GCCGCCGCGA TCAGATGCAT ACGCTGCGTC AGTTGGGCGG CATCTCGGGG
TTCCCGAAGC GTGACGAGTC GGAATACGAC ACCTTCGGTA CGGCGCACTC CAGCACGTCG
ATCTCGGCCG CGCTCGGCAT GGCGGTCGCG AGCAAGCTGA AGGGCGACAA CCGCATGGGC
ATCGCCGTGA TCGGCGACGG CGCAATGACG GCCGGTATGG CCTTCGAGGC AATGAACAAC
GCCGGTGTCG AAGACGACGT GCCGCTGCTG GTCATCCTGA ACGACAACGA CATGTCGATT
TCGCCGCCGG TCGGCGCGCT GAATCGCCAT CTGGCGCGCC TGATGTCGGG CCGCTTTTAC
GCGGCCGCGC GTGCCGGTGT CGAGCGCGTG CTGCGCGTCG CGCCGCCCAT GCTCGATCTC
GCCCGCAAGC TCGAAGAGCA CGCGAAGGGC ATGATCGTGC CGGCCACGCT GTTCGAAGAG
TTCGGCTTCA ACTACATCGG CCCGATCGAC GGCCATGATC TCGATTCGCT GATTCCGACG
CTGCAGAACA TCAAGGAACT GCGCGGTCCG CAATTCCTGC ACGTCGTGAC GAAGAAGGGC
CAGGGCTACA AGCTGGCCGA AGCCGATCCG GTGCTGTACC ACGGCCCGGG CAAGTTCAAT
CCGGCCGAGG GCATCAAGCC GGCCGCCACG CCGTCGAAGA AGACTTATAC GCAGGTGTTC
GGCGAATGGC TGTGCGACGC TGCTGAGCTG GATGCGCGCG TAATCGGCAT CACGCCGGCC
ATGCGTGAAG GTTCGGGCAT GGTGGAGTTC GAGAAGCGCT TCCCGGACCG TTATTTCGAC
GTCGGTATCG CCGAGCAACA CGCGGTGACG TTCGCAGGCG GCCTGGCGGC GGAAGGCATG
AAGCCGGTGG TCGCGATCTA CTCGACTTTC CTGCAACGCG CTTACGACCA GCTGATTCAC
GACGTCGCAC TGCAGAATCT GCCGGTGGTG TTCGCAATCG ACCGCGCGGG GCTCGTCGGC
GCGGACGGCG CGACGCACGC GGGTGCTTAC GACCTCGCGT TCCTGCGCTG CATTCCGAAC
ATGACGGTGA TGGCTGCGTC GGATGAAAAC GAATGCCGCC AGATGCTGTA CACCGCATTG
CAGCAACCGA ACCCCACGGC GGTGCGCTAC CCGCGCGGTG CCGGCACGGG CGTGGCGACC
ATCAAACAGA TGACGGCGCT GCCGCTCGGC AAGGGGGAGA TCCGTCGCGA AACGTCGCAG
CCGGCCGGCA AGCGCATTGC GATCCTGGCA TTCGGCACGA TGGTGGCGCC GTCGCTGGCG
GCGGCGGAGC AACTGGACGC AACCGTTGCG AACATGCGCT TCGTGAAACC GCTGGACGCC
GATCTGGTCC GTCAGCTGGC CGAGACGCAC GACGCCATCG TCACCGTCGA AGAAGGCTGC
GTGATGGGCG GCGCGGGTTC GGCGTGCGTG GAAGCCCTGC TTGCCAGTGG GGTTACTCGT
CCGGTACTAC AATTGGGCCT CCCTGACCGG TTCATCGATC ATGGAGATCC GGCCAAGCTG
CTCGCCGCGT GCGGTCTCGA CGCCGTGGGC ATCACCAAGT CGATCCGCGA GCGTTTTCTG
TTGAGCGGGG CGGTCGGCGG CCAGTCGTCG GTGAAGCGCG TCGCGTAA
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| Protein sequence | MYDLLKTIDD PAALRRLDRR QLQPLADELR AFVLDSVSQT GGHLSSNLGT VELTIALHYV
FDTPHDRIVW DVGHQTYPHK ILTGRRDQMH TLRQLGGISG FPKRDESEYD TFGTAHSSTS
ISAALGMAVA SKLKGDNRMG IAVIGDGAMT AGMAFEAMNN AGVEDDVPLL VILNDNDMSI
SPPVGALNRH LARLMSGRFY AAARAGVERV LRVAPPMLDL ARKLEEHAKG MIVPATLFEE
FGFNYIGPID GHDLDSLIPT LQNIKELRGP QFLHVVTKKG QGYKLAEADP VLYHGPGKFN
PAEGIKPAAT PSKKTYTQVF GEWLCDAAEL DARVIGITPA MREGSGMVEF EKRFPDRYFD
VGIAEQHAVT FAGGLAAEGM KPVVAIYSTF LQRAYDQLIH DVALQNLPVV FAIDRAGLVG
ADGATHAGAY DLAFLRCIPN MTVMAASDEN ECRQMLYTAL QQPNPTAVRY PRGAGTGVAT
IKQMTALPLG KGEIRRETSQ PAGKRIAILA FGTMVAPSLA AAEQLDATVA NMRFVKPLDA
DLVRQLAETH DAIVTVEEGC VMGGAGSACV EALLASGVTR PVLQLGLPDR FIDHGDPAKL
LAACGLDAVG ITKSIRERFL LSGAVGGQSS VKRVA
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