| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2514 |
|---|
| Symbol | |
|---|
| ID | 4006990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 607607 |
|---|
| End bp | 609202 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637950197 |
|---|
| Product | tripartite tricarboxylate transporter(TTT) family protein TctA |
|---|
| Protein accession | YP_552827 |
|---|
| Protein GI | 91777619 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.22099 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGTGC AATCTCTAAC GGATTTGTGG CAAGGCTTTG GCGTTGCGCT TGAGTGGCAC
AACCTGATGT GGTCTTTCTT TGGCGTCGTG GTGGGTAACC TGATCGGCGT ACTGCCGGGC
ATGGGGCCGT TGTCGGCGAT CTCGCTGCTG TTGCCGCTGA CGTATTCAAT GCATCCGGTA
CCCGCGATCC TGATGCTGGC AGGGGTCTTT TACGGCTCAC AGTACGGTGG GGCAATCGGT
GCGATTCTGT TGAATCTGCC TTGCCATCCT CCTCACGCGG TCACCTGTCT CGATGGCTAT
CCTCTGACCC GCCAGGGCAA AGGGGGCACC GCGCTGGGGA TCACCATGAT CTCTTCGTTC
TTCGCGGCAT CGGTCGGCAT TATCGTGATG ATTTTCCTGT CGCCGGTGCT CGTCAACGTG
GCCTTCAAAT TCGGACCCAG CGAATTGTTC TCGATCATGT TGCTCGGCTT GCTGGCCGGC
GGGACGATGT CGAGCGGATC GTCCGTGAAG GGCGTGGCAA TGACCGTATT CGGCATGCTG
ATCGGCGTTG CCGGCATCGA CATCAATTCC GGCGCAATCC GCTTCACGTT CGGTTTTCCC
GAACTGGCCG ATGGTGTGCA ACTGGTGGCG CTGGCGCTGG GTTTGTTCGG TGTCGCGGAG
TTCCTGCGGA ATGTCAATCG CATGCATGTG GTGGGTTCGA CTGCGAAGGT GCGCCTACGG
GATATGAGAC CGAGCCGCGC CGAGTTGAAG CAATCGTTCT GGCCTATGGT CCGCGGCACG
GGAATCGGCA CGCTGTTTGG CGCGATGCCG GGGACCGGGC CGACCATCAC GACGTTCATT
GCGTATGCGG TGGAGAAACG GATTTCGAAC TCGCCGGAGC GGTTTGGCAA GGGCGCATTG
GAGGGCGTGG CCGCGCCGGA AGCGTCATCC CACTCCAAGA CGCAGGTCGA TTTCATCCCG
ACCATGAGTC TCGGCATTCC GGGCGACCCG ATCATGGCGT TGCTGCTGGG CGCGTTGCTG
ATTCATGGAA TCCAGCCCGG TCCACTGTTG ATCAGCAAGC ACGCTGACAT TTTCTGGGGC
CTGGTGGCCA GTTTCTGGAT CGGCAACGTG CTTCTGGTGC TGCTGAACGT TCCGTTGATC
CAGCTATGGG TGAAGGTGCT TCAGGTTCCA TACCGGTTTC TGTATCCGTC GGCGCTTCTC
TTCATTGCCG TAGGTGTGTA TTCGACGGAC AACAGCCTAT TTGAAGTCGG CGAGGTGCTG
CTCTTTGGCG TGGTCGGCGC CGTTCTGCTT GCGCTCGAAT TCCCGGTAGC GCCCATTCTT
CTCGGCTATG TGCTCGGACC CATGATCGAG GAAAATTTCA GGCGGACGCT TTTGCTCTCG
CACGGACATC TTTCGGCGTT CATTCTGCAT CCGATCAGTG CTGTTTTTAT TGCGGCAAGC
GCGATTCTGA TCGCTGCCCA GGTTTACTTT GCCGTTCTTG CCCGCATTCG CAAAAGAAAA
CTCAGGGAAC TGTTGCCTGA ACCTCCGAAC ATGGAACAAA GCCAGAGCGC AAGAGAGCGG
GAACTCCTGC GTGGTGATGC GAACCAGCAT TCCTGA
|
|---|
| Protein sequence | MVVQSLTDLW QGFGVALEWH NLMWSFFGVV VGNLIGVLPG MGPLSAISLL LPLTYSMHPV
PAILMLAGVF YGSQYGGAIG AILLNLPCHP PHAVTCLDGY PLTRQGKGGT ALGITMISSF
FAASVGIIVM IFLSPVLVNV AFKFGPSELF SIMLLGLLAG GTMSSGSSVK GVAMTVFGML
IGVAGIDINS GAIRFTFGFP ELADGVQLVA LALGLFGVAE FLRNVNRMHV VGSTAKVRLR
DMRPSRAELK QSFWPMVRGT GIGTLFGAMP GTGPTITTFI AYAVEKRISN SPERFGKGAL
EGVAAPEASS HSKTQVDFIP TMSLGIPGDP IMALLLGALL IHGIQPGPLL ISKHADIFWG
LVASFWIGNV LLVLLNVPLI QLWVKVLQVP YRFLYPSALL FIAVGVYSTD NSLFEVGEVL
LFGVVGAVLL ALEFPVAPIL LGYVLGPMIE ENFRRTLLLS HGHLSAFILH PISAVFIAAS
AILIAAQVYF AVLARIRKRK LRELLPEPPN MEQSQSARER ELLRGDANQH S
|
|---|
| |