| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2470 |
|---|
| Symbol | pqqE |
|---|
| ID | 4007034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 657593 |
|---|
| End bp | 658816 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637950241 |
|---|
| Product | pyrroloquinoline quinone biosynthesis protein PqqE |
|---|
| Protein accession | YP_552871 |
|---|
| Protein GI | 91777663 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.616066 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACC TTTCACAACC TGGCGGCGCG GCACAGCCGC AAGCGACTCC GGACGGCGTG
GCACCGCCGC TCTGGCTGCT CGCCGAGCTG ACTTATCGCT GCCCCCTGCA CTGCGCGTTC
TGCTACAACC CGGTCGACTA TACGGATCAC AGCCGCGAGC TCAGCACCGA ACAATGGATC
GGCGTGCTGC GCGAGGCGCG CGCGCTCGGT GCCGCGCAAC TGGGGTTTTC AGGCGGCGAA
CCGCTCGTGC GCGACGATCT GGAAGTGCTG GTCGGCGAGG CGCGCAAGCT CGGCTTCTAT
ACGAATCTGA TCACCTCCGG TGTCGGTCTC ACCGACAGGC GCCTCGGCGA TCTGAAGGCC
GCCGGCCTCG ACCACATCCA GCTGTCGTTC CAGGATTCGA CGCAGGAACT GAACGACTTC
CTGAGCAGTA CGCGCACCTT CGATCTGAAA CAACGCGTTG CCGCATCGAT CAAACGGCAC
GGCTTTCCGA TGGTGCTCAA CTGCGTGCTG CACCGCTACA ACCTGCCGCA CGTCGACAAA
ATCATCGACA TGGCGCTCGC AATGGGAGCC GAATACCTGG AGCTCGCCAA CACGCAGTAC
TACGGCTGGG CGCATCAGAA CGAAGCTCAA CTGATGCCGA CACGCGAACA GCTGGAGGAA
GCCGAAGCGG TAGTCGAGCG TTATCGCCGC ACGCAGGGTG AGCGCTGCAA GATCTTCTTC
GTGGTGCCGG ACTACTTCGA GCGACGCCCG AAGCGCTGCA TGAACGGCTG GGGCGCGGTG
TTTCTCGGCG TCGCTCCGGA CGGCGCGGCG CTGCCCTGTC ACGCCGCCCG CAGTCTGCCG
GGACTCGTGC TGCCGAACGT GAAAGAGACG CCGCTGCGCG AAATCTGGTA CGAAAGCGAC
GCGTTCAACC GCTTCCGCGG CCTCGCATGG ATGAAAGAGC CCTGCCGTAG CTGTGACGAG
AAAGAACGGG ACCTCGGCGG CTGTCGCTGC CAGGCCTATC TGCTCACCGG CGACGCGGCC
AACGCCGACC CGGTCTGCGA CAAGTCGCCC GCGCACGACA CCGTGGTGAG CGTGGTGAAC
ATGGCACGGC GTGCGGCCGC CGCAGGCGAA GCGCGCGAGC AGCCGATCCT GTTTCGCAAC
GACACCAACT CGCGCAAGCT GGCATCCGCT TTGTCCACTG CGGCGAGCGG CGATACCTGC
GGCCACGGCG GCACTGGAGG CTGA
|
|---|
| Protein sequence | MTDLSQPGGA AQPQATPDGV APPLWLLAEL TYRCPLHCAF CYNPVDYTDH SRELSTEQWI
GVLREARALG AAQLGFSGGE PLVRDDLEVL VGEARKLGFY TNLITSGVGL TDRRLGDLKA
AGLDHIQLSF QDSTQELNDF LSSTRTFDLK QRVAASIKRH GFPMVLNCVL HRYNLPHVDK
IIDMALAMGA EYLELANTQY YGWAHQNEAQ LMPTREQLEE AEAVVERYRR TQGERCKIFF
VVPDYFERRP KRCMNGWGAV FLGVAPDGAA LPCHAARSLP GLVLPNVKET PLREIWYESD
AFNRFRGLAW MKEPCRSCDE KERDLGGCRC QAYLLTGDAA NADPVCDKSP AHDTVVSVVN
MARRAAAAGE AREQPILFRN DTNSRKLASA LSTAASGDTC GHGGTGG
|
|---|
| |