Gene Bxe_B1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1965 
Symbol 
ID4007539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp1203834 
End bp1204247 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content59% 
IMG OID637950737 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_553367 
Protein GI91778159 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0644561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.179898 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACTG AACGCTTCGC CGTCGGCGAG CAACGCAGAC GGGACGTGCT CGGCAACGAG 
TATGTCGATC AATCCCTGCG CAACGCCGAC GCTTTCAACC GTCCCTTCCA GGAACTCGTC
ACGGAGTACT GCTGGGGCGA ATGCTGGGGC GACCCAACCC TCGTACCGCG CGAGCGCAGT
CTGCTCAATC TGGGAATGAT TGCGGCGCTG GGAAAAATGC ATGAGTTCGA GTTGCATGTC
CGCGGCGCCT TGAAAAACGG CGTGAGCCAT GAACAGTTGC GGGCCGCGCT CATTCAGATA
GCGGTGTATT GCGGCATTCC GGTCGGCGTC GATTGTTTCC GCGTCGCGCG GAAAGTTCTC
GCCGAGCAGA ATGCCGCGCC TTCCATCGAT TCATCTTCAA TCAGGGAACA ATGA
 
Protein sequence
MDTERFAVGE QRRRDVLGNE YVDQSLRNAD AFNRPFQELV TEYCWGECWG DPTLVPRERS 
LLNLGMIAAL GKMHEFELHV RGALKNGVSH EQLRAALIQI AVYCGIPVGV DCFRVARKVL
AEQNAAPSID SSSIREQ