| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1828 |
|---|
| Symbol | |
|---|
| ID | 4007679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 1345838 |
|---|
| End bp | 1346560 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637950865 |
|---|
| Product | ABC amino acid transporter, inner membrane subunit |
|---|
| Protein accession | YP_553490 |
|---|
| Protein GI | 91778282 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4215] ABC-type arginine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 0.300709 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.358336 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTGA TACAGATGCT CGGCTTCGGG CCGGAAGGCT GGGGCGGCGT GTTGCTGCTC
GCGGCGTTGA TGACGGTCGC GCTCACGCTC GCGGCGCTCG CGGTCGGCGC CGTGTTCGGC
GCGCTGGTGG CGGCGGCCAA GCTGTCGCGC TTGCGTACGT TGCGCGTGAT CGGCGATATC
TACACCACGG TGTTTCGTGG CGTGCCTGAA CTGCTCGTCA TCTATCTGTT CTATTTCGGT
GGCTCGACGC TCGTCACGAA CGTCGGCCAG TGGTTCGGCG CGGAAGGTTT CGTCGGCGTG
CCGCCGTTCG TGATCGGCGC GCTGGCCGTG GGCATGATTT CGGGCGCCTA TCAGGCCGAG
GTGTACCGCT CGGCGGTGCT GGCGGTGTCG CGCGGCGAAC TCGAAGCCGC GCGCGCGATC
GGCATGCCGA CGCTGACGAT GGCGCGCCGC ATCCTGATTC CGCAAGTGCT GCGGTTCGCG
TTGCCCGGCA TCGGCAATGT CTGGCAACTG AGCCTGAAGG ACTCGGCGCT GATCTCCGTG
ACGGGGCTCG CCGAATTGCT GCGCACGAGC CAGGTGGCGG CGGGCTCCAC GCATCAATAC
TTCACGTTCT TCGTGGTGGG CGGCGCGCTT TATCTGCTCA TGACCAGCAT CTCGAACCGC
GTCTTCAATC GCGCCGAAGC GCGCGTGGGC CGGTCCTTCA AGCGCAACTT CGCGCGTAAC
TGA
|
|---|
| Protein sequence | MALIQMLGFG PEGWGGVLLL AALMTVALTL AALAVGAVFG ALVAAAKLSR LRTLRVIGDI
YTTVFRGVPE LLVIYLFYFG GSTLVTNVGQ WFGAEGFVGV PPFVIGALAV GMISGAYQAE
VYRSAVLAVS RGELEAARAI GMPTLTMARR ILIPQVLRFA LPGIGNVWQL SLKDSALISV
TGLAELLRTS QVAAGSTHQY FTFFVVGGAL YLLMTSISNR VFNRAEARVG RSFKRNFARN
|
|---|
| |