| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1796 |
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| Symbol | |
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| ID | 4007711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 1384136 |
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| End bp | 1385488 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637950897 |
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| Product | TRAP C4-dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_553522 |
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| Protein GI | 91778314 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.388967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000126735 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACTTG CCATTCTCTC CGTCAGTTTC CTCGTCTTTC TTCTTCTCGG CGTTCCTGTT
TCCTTCGGGC TCGGGCTCTC GTGTGTCCTG ACTTACCTGT ACGAAGGCTT GCCGGCGGCC
ACCGCCATGC AGTCGATGAT TTCGGGCATC AACGGTTTTT CGTTTCTCGC GGTGCCGTTC
TTCATTCTGT CCGGTGAACT GATGCTGCAC GGCGGTATCG CGGACCGTAT CCTGCGTTTC
GCGCAAGCCA CCGTCGGGCA TTTTCGCGGC GGCCTGGGCA TGGCCAACGT GGTCGCGTGT
ACGTTGTTCG GCGGCGTCTC CGGTTCGCCT TCGGCGGATA CCTCTGCAAT GGGCGGCGTG
GTGATCCCGC TGATGAAGCG TGAAGGCTAC AGCGCGGCCT ACGCGGTCAA CGTGACGACA
CACTCTTCGC TGGCGGGCGC GTTGATGCCG ACGTCGACCA ACATGATCAT CTATGCGTTC
GCGGCCCAAG GCATCACCGG CACCTTGAAT GGACACCCGA TGAGCGGAGT GTCGATTGGC
GATCTGCTGT TTTCCGGTCT GCTGCCGGTA TTGTGGGTGA TGGGTTTCGT GCTGCTCGCC
GCGTACTGGC AAGCCGTCAA ATATGGCTAT CCGCGTCGTC CGGATGGTTC GACCGAATTG
CAGCGATTCC CCGGCTGGTA CGCCGTGGCC CGCACGTTCC TCGGCGCATT GCCTGGCCTG
ATGGTGATCG CGATCATTCT GGTTTGCGTC GCAAAGGGTA TTGCCACCGC GACGGAAGCC
GCCGCAATCG CCGTGTTTTA TTCGCTCGTG CTGACGATCG TCGTGTATCG CTCGATGACG
ATGAAGAAGC TGTTTCATGC GCTCTCGAAG GCGGCCAAAA CCACCGGCGT GGTGCTGCTG
CTGATCGGCG TGTCGAACAT GTTGCGCTAC CAGATGGCTT ATCTGGAGAT TCCGGATGCG
ATCGAACACA TGCTCGACGG CGCGACCAGC TTGCCCTGGC TGATGCTGCT GTACATCAAC
CTGATCCAGA TTTTCCTCGG TACGTTCGTC GATATGGCGG CGCACATCCT GATCACCACG
CCGCTGTTCC TGCCGATGGC GATGCACGCG GGCGTAGGTC CGGTGCAGTT CGGGATCATG
ATCCTGCTGA ACTGCGCACT GGGTCTGGTG CACCCGCCGA TCGGTTCGGT GCAGTTCATC
GGCTGCGCGA TCGGCAATGT GTCGATTGGT GAAACTACCA AGGTGGCGTG GCCGTATTAC
CTGGCGATCT TCAGCGCGAT CAACATCGTG ACTTACGTGC CGATGTTTTC CACCTGGCTG
CCGAGCCTGA TCAATGGCCA TCCGGTATTT TGA
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| Protein sequence | MELAILSVSF LVFLLLGVPV SFGLGLSCVL TYLYEGLPAA TAMQSMISGI NGFSFLAVPF
FILSGELMLH GGIADRILRF AQATVGHFRG GLGMANVVAC TLFGGVSGSP SADTSAMGGV
VIPLMKREGY SAAYAVNVTT HSSLAGALMP TSTNMIIYAF AAQGITGTLN GHPMSGVSIG
DLLFSGLLPV LWVMGFVLLA AYWQAVKYGY PRRPDGSTEL QRFPGWYAVA RTFLGALPGL
MVIAIILVCV AKGIATATEA AAIAVFYSLV LTIVVYRSMT MKKLFHALSK AAKTTGVVLL
LIGVSNMLRY QMAYLEIPDA IEHMLDGATS LPWLMLLYIN LIQIFLGTFV DMAAHILITT
PLFLPMAMHA GVGPVQFGIM ILLNCALGLV HPPIGSVQFI GCAIGNVSIG ETTKVAWPYY
LAIFSAINIV TYVPMFSTWL PSLINGHPVF
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