| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1592 |
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| Symbol | |
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| ID | 4007919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 1611293 |
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| End bp | 1612978 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637951102 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_553722 |
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| Protein GI | 91778514 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.860333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGA ACGAATACGA CTACATCATC GTGGGCGCGG GTTCGGCGGG CAATGTGCTC
GCCTCGCGCC TCGCCGAAGA CGCGGACGTG ACCGTGCTGC TGCTCGAAGC GGGCGGCCCC
GACTACCGCT TCGACTTCCG CACGCAGATG CCGGCCGCGC TCGCCTATCC GCTGCAAGGA
CGCCGCTACA ACTGGGCGTA CGAAACGGAC CCCGAGCCGC ACATGAACAA CCGGCGCATG
GAATGCGGGC GCGGCAAGGG GCTCGGTGGC TCGTCGCTGA TCAACGGCAT GTGCTATATC
CGTGGCAATG CGCTCGATTA CGACGGCTGG GCCGCGCACG CGGGCCTCGA AAACTGGACC
TATCTGGATT GCCTGCCGTA TTTCCGCAAG GCCGAGACGC GCGATATCGG TGCGAACGCG
TATCACGGCG GAGACGGTCC GGTGCACGTC ACCACCAGCA AGCCCGGCAA CAACCCGCTC
TTTGCCGCAA TGGTCGAAGC CGGTGTGCAG GCAGGCTTTC CGCGTACCGA CGATCTGAAC
GGCTATCAGC AGGAAGGCTT CGGCCCGATG GATCGCACGG TGACGGCAAA CGGCCGGCGC
GCCAGCACGG CGCGCGGCTA TCTGGATCGC GCGAAAGCGC GGCCGAATCT GACCATCGTC
ACGCATGCCG TGACGGATCG CGTGCTGTTC TCGGGCAAGC GCGCAGTCGG CGTCTCGTAT
CTGCATCATG GCAATGTGCT GAATGCGCAG GCTCGCCGCG AGGTGCTGGT GTGCAGCGGC
GCGATTGCTT CGCCGCAACT GCTGCAGCGC TCGGGCGTGG GCCGCTCCAC GTGGCTGCGC
GAACTGGACG TGCCGCTCGT TCACGATCTG CCGGGTGTGG GCGAGAACCT GCAAGACCAT
CTGGAGATGT ATATCCAGTA CGAGTGCAAG GAGCCGGTTT CGCTTTATCC GGCTTTGCAG
TGGTGGAATC AACCGGCCAT CGGGCTCGAA TGGATGCTGA ACGGAACCGG CATCGGCGCG
AGCAACCAGT TCGAAGCAGG CGGCTTTATC CGCACGCGCG ACGACGATCC GTGGCCGAAC
ATCCAGTATC ACTTCCTGCC GGTCGCGATC AATTACAACG GTTCGAACGC GATCAGGATG
CACGGTTTTC AGGCGCACGT CGGTTCGATG CGCTCGCCGA GCCGTGGCCG CGTGAAGCTC
ACCTCGCGCG ATCCGAACGC GCATCCGGGC ATCCTGTTCA ACTATATGGC CGATCCGCTC
GACTGGCGCG AGTTCCGCGA CGGCATTCGC ATCACACGCG AGATCATGCG GCAACCGGCG
CTCGACCGTT ATCGCGGCCG CGAACTGAAC CCCGGCGCCG AACTGACTAC CGACGAACAG
CTCGATAGTT TCGTGCGCAT GCGAGCGGAG ACGGCGTTTC ATCCATCCTG TTCCTGCAAG
ATGGGCTACG ACGACATGGC CGTAGTCGAC AACGAGGGCC GCGTGCACGG CATGCAAGGA
CTGCGTGTGG TGGATGCGTC GATCATGCCG CGCATCACCA CCGGCAATCT GAACGCGCCG
ACCATCATGC TGGCGGAGAA GATCGCCGAC CGTATTCGCG GACGCGAGGC GCTGGCGCGG
GTGGATACGC CCTATTTCGT GGCGAATGGC GTGGCTTCGC GCAAACGGGA GAGCGCGACG
GTGTGA
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| Protein sequence | MAANEYDYII VGAGSAGNVL ASRLAEDADV TVLLLEAGGP DYRFDFRTQM PAALAYPLQG
RRYNWAYETD PEPHMNNRRM ECGRGKGLGG SSLINGMCYI RGNALDYDGW AAHAGLENWT
YLDCLPYFRK AETRDIGANA YHGGDGPVHV TTSKPGNNPL FAAMVEAGVQ AGFPRTDDLN
GYQQEGFGPM DRTVTANGRR ASTARGYLDR AKARPNLTIV THAVTDRVLF SGKRAVGVSY
LHHGNVLNAQ ARREVLVCSG AIASPQLLQR SGVGRSTWLR ELDVPLVHDL PGVGENLQDH
LEMYIQYECK EPVSLYPALQ WWNQPAIGLE WMLNGTGIGA SNQFEAGGFI RTRDDDPWPN
IQYHFLPVAI NYNGSNAIRM HGFQAHVGSM RSPSRGRVKL TSRDPNAHPG ILFNYMADPL
DWREFRDGIR ITREIMRQPA LDRYRGRELN PGAELTTDEQ LDSFVRMRAE TAFHPSCSCK
MGYDDMAVVD NEGRVHGMQG LRVVDASIMP RITTGNLNAP TIMLAEKIAD RIRGREALAR
VDTPYFVANG VASRKRESAT V
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