Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1547 |
Symbol | |
ID | 4007964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 1661256 |
End bp | 1661996 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637951147 |
Product | polar amino acid ABC transporter inner membrane protein |
Protein accession | YP_553767 |
Protein GI | 91778559 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.090707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.921266 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCTCG TGAACTTCTG GCTGGACCCT CGATATCTCG GCTGGCTCGC GCACGGCTTT CTCATCACGC TGGTCCTTTC GGCGTGCGTG AGCGTATGCG CGACGCTGCT CGGATTCGGG CTGGCAATGG CCCAGATCGC CCAGCAGCGC AGCGTTGCTG CGGCGGCAAG ACTCTATGTC CTCGTGTTCC GCAATTCTCC GCTGCTGGTG CAATTGCTGT TCTGGTACTT CGGCGCGGCG ACGCTGCTGC CGCAGCCGTG GATGACATGG CTAAACACGC CGCATGTCCT CGGCGCCGCG CCCTTTGCGC TGCACTGGCC GAGCTTCGAA CTGTTCGCCG GCTGGCTTGG CCTGACCTGC TACAGCACGG CTTTTATCGC GGAAGAGTTC CGCGCCGGAA TCCGCGGTGT GGGCATCGCG CAATATCAGG CGGGCGCCGC ATTGGGGATG ACGCGTTACA CCACCTTGCG GCACGTCATC CTGCCGCAAG CGGTGCGTAT CGCCACGCCG CCGCTTGCCG GGCAATACAT GAATATCGTG AAGAATTCGT CGCTGACGAT GGCGATCGGC GTGGCCGAAC TGTCCTATAT GTCGCGCCAG GTCGATACGG AAAGCTTCCG GACCTTTCAG GCGTTCGGCA CGGCTACCGT GCTTTATATC GGCACCATCG CGTTGATCGA AATCGCGCAG GTGATCTGGC AGAACACCGG TGTGCGCGCG TTGCAGCGGG GGCAGGCATG A
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Protein sequence | MHLVNFWLDP RYLGWLAHGF LITLVLSACV SVCATLLGFG LAMAQIAQQR SVAAAARLYV LVFRNSPLLV QLLFWYFGAA TLLPQPWMTW LNTPHVLGAA PFALHWPSFE LFAGWLGLTC YSTAFIAEEF RAGIRGVGIA QYQAGAALGM TRYTTLRHVI LPQAVRIATP PLAGQYMNIV KNSSLTMAIG VAELSYMSRQ VDTESFRTFQ AFGTATVLYI GTIALIEIAQ VIWQNTGVRA LQRGQA
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