| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1456 |
|---|
| Symbol | |
|---|
| ID | 4008055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 1768890 |
|---|
| End bp | 1770053 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637951238 |
|---|
| Product | putative DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_553858 |
|---|
| Protein GI | 91778650 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.273415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00674532 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCG ATGAGATCGC GCTGAGCGAA CCGGCTTGCG CGGCGCGCGA GATCGATTTC
GTCAACGCCG TGCTGCAATC GTCGCGCTGG AGCGACGGGC CGATGCTCGA CTCGTTCGAG
CGCGCGTTCG CCGGCTGGGT GGGCCGCACG CATGCGGTTG CGGTGGCGAG CGGCACGCTC
GCCACCTGGA TTGCGTTGCG CGCGATGGGG CTCGGCGCGG GCGACGAAGT GATCTGCGCA
TCCCACACCT GGCACCAGGT GGCGCAGGCG ATCACGCTGG CGGGAGCCGT GCCGGTGTTC
GCCGACATCG ACTACTGGAG CGGATGTCTG AGCGCCGAAA AAGCCGCGCA GAAAATCGGC
CCGCGCACGC GCGCGATTCT CGCCGGCAAC ACGAACGGCC ACCCGGCCGC CTGGGGCCCG
CTGCGCGACC TGGCCGACGC GTATGGCTTG CGCCTGATCG AAGACAGTAC CGAGGCGCTC
GGCTCGCGCT ACCGCGGCCG CAACACCGGC TGTTTCGGCG ACGTCTCGGT GTTCGACTTC
TCCGGCCCGT CCGCGCTGAG CACGGGAGCG GGCGGCATGC TCGTCACCGA CGATGACGAA
CTCGTGCACG AACTGCGCTA TCTGCGCGAG CGGCGCGTCA CGGACCGCGC GTCGGTTTCG
GTCGGCTCGT GGGTGCCGCT GCAAGCCGGC ATCAGCGATC TGACCGCCGC GCTCGGTCTC
GCGCAACTGG CCGAACTCGA CACGCGCCTC GCCCAGCGCA AACAGGTCGA GAGCTGGTAT
CACGAAGAGA TGCAGAGCTT CGAGGGAATC AAGCCGCCCT ATGTGGCCGA GGACGTCGAG
GAAGTGCACT GGATGCTCTA TGTCGTCCAC CTGGGCAAGC GTTTTACGCA GAGCGCGCGC
GCCCAGATGA TCGACGACAT GAAATCCTGC GGCATCGAGA CCGCGCCATA CAGCCATCCG
CTGCATCAGC AGTTCCATTA CATGAACACG GGCGACGCGA TCGGCCGCAA GCGCGGTCTG
CTGCCCGATA CCGAGCGCAT CGGCGACCGC GCGCTGGCGC TGCCGCTGCA CACGCTGCTC
GACGCCGATC AGGTCAGGTA CATCGTCAAG ACGCTGAAGG ACACCGCGAC CAACGTGGGC
GCCGGTGCCG CCATTTATCT GTGA
|
|---|
| Protein sequence | MEIDEIALSE PACAAREIDF VNAVLQSSRW SDGPMLDSFE RAFAGWVGRT HAVAVASGTL
ATWIALRAMG LGAGDEVICA SHTWHQVAQA ITLAGAVPVF ADIDYWSGCL SAEKAAQKIG
PRTRAILAGN TNGHPAAWGP LRDLADAYGL RLIEDSTEAL GSRYRGRNTG CFGDVSVFDF
SGPSALSTGA GGMLVTDDDE LVHELRYLRE RRVTDRASVS VGSWVPLQAG ISDLTAALGL
AQLAELDTRL AQRKQVESWY HEEMQSFEGI KPPYVAEDVE EVHWMLYVVH LGKRFTQSAR
AQMIDDMKSC GIETAPYSHP LHQQFHYMNT GDAIGRKRGL LPDTERIGDR ALALPLHTLL
DADQVRYIVK TLKDTATNVG AGAAIYL
|
|---|
| |