| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1453 |
|---|
| Symbol | |
|---|
| ID | 4008058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 1770580 |
|---|
| End bp | 1771725 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637951241 |
|---|
| Product | putative cysteine desulfurase |
|---|
| Protein accession | YP_553861 |
|---|
| Protein GI | 91778653 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.273415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00591907 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTTATC TCGACCACAA CGCAACCACG CCGCCGGCCC CCGCCGTCGT GCAGGCGATG
CTGTCCGTCC TGACCGATGT ATGGGGCAAC CCGTCGTCGC AACATGCGCT CGGGCAGCAG
GCGAAGGGCG CGCTCGCGGC GGCCCGCGCG AGCATCGCGC GAATGCTCGC CTGCAAGCCG
GCGGAACTGG TCTTCACCAG CGGCGCGACC GAAGCCAATC ATCTGGCGGT GTGCGGCTTG
CACGCGGCGG CGCCGCAGGG CCGGCACCGT GTCGTATTCA GCGCGGTCGA GCATGCCGGG
CACCTGAAAC TGGCGCGTGC GCTGGCGGCG CGCGGCATTG CGCTCGACTG CATTGCCGTG
CGGCCCGACG GCTCGCTGGA CCTCGACAGT GCCGCCGCGC TGATCGGACC TGATGTGGCC
GTGGTCTCGC TGATGGCGGC CAACAACGAG ACCGGCGTGG TGATGCCGGT CGCCGAAGTG
CGCGATCTCG CGCATGCGGC CGGCGCGCGC CTGCATGTCG ATGCGACGCA GCTCATCGGC
AAGCTGCCGT TCGACTTCGC CCGGAGCGGG ATCGATGCGG TGTCGCTGTC GGCTCACAAG
CTGCGCGGGC CGAAAGGCAT CGGCGCGCTG CTGGTGCGCC AGGGCGTGAC GCTGACGCCG
CAGGTACAGG GCAGCCAGGA GCGGCATCGG CGCGGCGGCA CCGAGAATCT GCCGGCCATC
GCCGGCTTTG CGGCCGGGCT CGAACGTCTC GGCGACGTGG CGAGCGAAGC GGCGCGCGTA
GGCATGCTGC GTGACGCACT GGAGCAAGGG TTGAAGCGCG CGCTGCCGGA GGTCCACGTT
TTTTCTGCGC AGGCGGCGCG CCTGCCCGGC ACCAGCTACC TGCGCTTCGG ACTGCTTCCC
GCCGAGGTCG TGTTGCAGCG GCTCGGGCGG CTGGGTGTTG CCGCGTCGTC GGGCTCGGCC
TGCTCGTCGG GCGGCAGCGA GCCTTCGCAT GTGCTCACGG CCATGCGCGT GCCGCGCGAC
GAGGCGCTGG CGGCGGTGCG GCTGTCGCTC GGTGAAACCA CCACCGCACA GGACATTCAG
TATCTGCTCG CCCATTTGCC GCCGCTGTTG CGTCCGTTGC TGGCGCAACC CGCATGTTCC
GCCTGA
|
|---|
| Protein sequence | MIYLDHNATT PPAPAVVQAM LSVLTDVWGN PSSQHALGQQ AKGALAAARA SIARMLACKP
AELVFTSGAT EANHLAVCGL HAAAPQGRHR VVFSAVEHAG HLKLARALAA RGIALDCIAV
RPDGSLDLDS AAALIGPDVA VVSLMAANNE TGVVMPVAEV RDLAHAAGAR LHVDATQLIG
KLPFDFARSG IDAVSLSAHK LRGPKGIGAL LVRQGVTLTP QVQGSQERHR RGGTENLPAI
AGFAAGLERL GDVASEAARV GMLRDALEQG LKRALPEVHV FSAQAARLPG TSYLRFGLLP
AEVVLQRLGR LGVAASSGSA CSSGGSEPSH VLTAMRVPRD EALAAVRLSL GETTTAQDIQ
YLLAHLPPLL RPLLAQPACS A
|
|---|
| |