| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1250 |
|---|
| Symbol | |
|---|
| ID | 4008261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 1982807 |
|---|
| End bp | 1985101 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637951436 |
|---|
| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
|---|
| Protein accession | YP_554056 |
|---|
| Protein GI | 91778848 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
|---|
| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.33578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCA CGCACATTCC CGGCTTTCCC CGCATCGGCG CGCAGCGCGA ACTGAAATTC
GCGCAGGAAT CGTTCTGGCG CGGCGAATCC GGCGAGCCGC ATCTGCGTGG CGTCGCGCGC
GAATTGCGCG CGCGTCACTG GCAATTGCAA CAGGACGCCG GACTGGATTT CGTCACCGTC
GGCGATTTCG CCTACTACGA CCAGATGCTC AATCTGAGCG CGCTGCTCGG CGCCTTGCCG
CAGCGTTTCG GCTTCGAACC GAAGACGCTG TCGCTCGCCG AGTACTACGA GCTTGCGCGC
GGCAACGCGG CGCAGCCGGC CATGGAAATG ACCAAATGGT TCGACACGAA CTATCACTAC
CTCGTCCCCG AACTGGGACC GCAGACGAGT TTCGACGGCG GCGTGGAGTG GTTGTTCGAG
GAGATCGACG AAGCGCTCGC GCTGAATCTG CCGGTCAAGC CGGTGCTGAT CGGGCCGATC
ACTTATCTGT GGCTGTCCAA GAGCCATGTT GCCGGGTTCG ACCGTTTGTC GCTGCTGCCG
AAGCTCGTGA TCCGCTACGC CCGTCTGCTC GACAAGCTCA GGCAGAGCGG CATCGAATGG
GTGCAGCTCG ACGAGCCGGC CTTGTGCGTG GATTTGCCCG CGGAATGGCT CGACGCGTTT
TCCGCCGCGT ATGAGGTGCT CGGCACGTCG GGCGTGAAGG TGCTGCTCGC CACGTATTTC
GAAAGCGCGG CGGAGCACGC GCCGCGTGTA GCCGCGCTGC CCGTTGCCGG TGTGCATCTC
GACCTCGTGC GTGCCCCGCA GCAGCTCGAC GCATGGCGCG CGGCGTTGCC TGCGCACGCG
GTGCTGTCGG CCGGTGTGAT CGACGGCCGC AATATCTGGC GCGCGGATCT CGGCGAGATC
GTCGAGTCGC TGCAGAGCTT GCAGGCGGAA TTCGGCGAGC GCTTGTGGAT CGCACCGTCG
TGCTCGCTGC TGCACGTGCC GGTCTCGCTC GACGCCGAGA AAAAACTCGA CGCCGATCTG
AAATCCTGGC TCGCGTTCGC CACCGAAAAA CTCGCTGAAG TCGCCACGCT CGCCCTCGCG
TTGCGCGATC CCGCCGCGGC CGAACCGGCG CTCGCCGCCA CCGACCGCGC GCTCGAAGCA
CGCCGCCGCT CCAGCGCGGT AGTCAACGCG CTCGTGCAAA AACGCGTAGC TGCAGTGAGC
AGCGCGATGG CGGAACGGCA AAGCCCGTTT GCCGAACGCA ACCGTCTGCA GCGCGAAGCG
CTCGGCCTGC CGCTCCTGCC GACCACCACG ATCGGCTCGT TCCCGCAAAC GGCGGCGATC
CGCCAGGCGC GCGCCGCCTA CAAACGTGGT GAACTGCGCG CACTCGACTA TCTGCAGCGC
ATGCGCACCG AGATCGAAAT CGCCGTGCGC AAACAGGAAG AGCTCGGGCT CGACGTGCTG
GTGCATGGCG AAGCCGAGCG CAACGACATG GTCGAATATT TCGGCGAACA GTTGTGGGGC
TATGCGTTCA CGGAAAACGG CTGGGTGCAG AGTTACGGCT CGCGCTGCGT GAAACCGCCG
ATCATCTACG GCGATGTCTA CCGGCCCGAA CCGATGACGG TCGAGACCAC GCGTTACGCG
CAATCGCTCA CGCAGCGCCT GATGAAAGGC ATGCTGACCG GCCCGGTGAC GATGCTGCAA
TGGTCGTTCG TGCGCGACGA CCAGCCGCGC TCGACCACCG CGCTGCAACT CGCGCTCGCG
ATCCGCGACG AGGTCGTGGA TCTGGAAAAG GCCGGCATTC GCATCATCCA GATCGACGAG
CCGGCTTTCC GCGAAGGCTT GCCGCTGCGT CGCGCGGACT GGGCCGCGTA TCTGGAATGG
GCCACGCGCG CGTTCCGCAT TTCGGCAGCG GGCGTCGCCG ATCAAACGCA GATTCATACG
CACATGTGTT ATTCGGAGTT CAACGACATT CTGCCGTCGA TCGCCGCGAT GGATGCCGAC
GTAATCACCA TCGAGACCTC GCGCTCGGCG ATGGAACTGC TCGACGGCTT CGGCGCCTTC
GCGTATCCGA ACGAAATCGG CCCGGGCGTC TACGATATCC ACTCGCCGCG CGTGCCGGGC
GCGGACGCGA TGCAGCGTCT GCTGGAACGC GCGTGCGAAG TGATTCCGGC CGAGCGCCTG
TGGGTCAATC CGGATTGCGG GTTGAAGACG CGCGGCTGGC CGGAAACGGA GGCAGCGCTC
GCGAACATGG TGCGGGCTGC CAAGGCATTG CGCGCGAAGC TGGCGGCGAG ACAGGCGGAC
GAGTTGACCG CGTAA
|
|---|
| Protein sequence | MARTHIPGFP RIGAQRELKF AQESFWRGES GEPHLRGVAR ELRARHWQLQ QDAGLDFVTV
GDFAYYDQML NLSALLGALP QRFGFEPKTL SLAEYYELAR GNAAQPAMEM TKWFDTNYHY
LVPELGPQTS FDGGVEWLFE EIDEALALNL PVKPVLIGPI TYLWLSKSHV AGFDRLSLLP
KLVIRYARLL DKLRQSGIEW VQLDEPALCV DLPAEWLDAF SAAYEVLGTS GVKVLLATYF
ESAAEHAPRV AALPVAGVHL DLVRAPQQLD AWRAALPAHA VLSAGVIDGR NIWRADLGEI
VESLQSLQAE FGERLWIAPS CSLLHVPVSL DAEKKLDADL KSWLAFATEK LAEVATLALA
LRDPAAAEPA LAATDRALEA RRRSSAVVNA LVQKRVAAVS SAMAERQSPF AERNRLQREA
LGLPLLPTTT IGSFPQTAAI RQARAAYKRG ELRALDYLQR MRTEIEIAVR KQEELGLDVL
VHGEAERNDM VEYFGEQLWG YAFTENGWVQ SYGSRCVKPP IIYGDVYRPE PMTVETTRYA
QSLTQRLMKG MLTGPVTMLQ WSFVRDDQPR STTALQLALA IRDEVVDLEK AGIRIIQIDE
PAFREGLPLR RADWAAYLEW ATRAFRISAA GVADQTQIHT HMCYSEFNDI LPSIAAMDAD
VITIETSRSA MELLDGFGAF AYPNEIGPGV YDIHSPRVPG ADAMQRLLER ACEVIPAERL
WVNPDCGLKT RGWPETEAAL ANMVRAAKAL RAKLAARQAD ELTA
|
|---|
| |