| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1183 |
|---|
| Symbol | |
|---|
| ID | 4008328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2064456 |
|---|
| End bp | 2065895 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637951503 |
|---|
| Product | sigma-54 dependent trancsriptional regulator |
|---|
| Protein accession | YP_554123 |
|---|
| Protein GI | 91778915 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.167221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.634355 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGA CTTGCACGCC TGTCGACACG GAACGCACCG TTCTCTATGT GTCGAATTCG
CCGGATCAGA AACTCGCCGC TTTTCTGGCG GCTTCTGGCT GGCAAGCGGT GCATGCCAAA
AGCACGGCTG TCGCCGAACG CATGATCGAG CGCGGCAACA TCAAGGTCGG CCTCGTCGAA
CTGCCGGGCG ACTGCACATC CCAACATCTG TCCGCGCTGG CGTCCTGCAT GCGGCGCGTC
GAAACCAACT GGGTCGCCCA GATCGCGCCG GGTCAGGCGG CGAACGAACT GGTCAGCCGT
TTCATCCTCG ACTATTGCTT CGATTTCGTC ACCCGGCCGT GGCTGAACGA GCGGCTCGTG
TTCGCGCTCG GCCACGCGCA TGGCCTGTCG AGCCTGCGGC AGGTGGAGGT CGCGCCGGAG
CCGTCGCTCG GCCGCCACGG CATGGTCGGG CAATGCGAGG CCATGCAGCA GTTGTACCGG
CGCATCGACA AATGCGGCGT GACGAACGCG CCGGTATTCG TCGCGGGCGA GTCGGGCACC
GGCAAGGAAC TGACCGCCAA GGCGATTCAC GAACGTTCGC CGCGCGCCGG CCGCACCTTC
GTCGCGATCA ATTGCGCGGC GATTCCGCCT AGCCTGCTGC AGGCCGAATT GTTCGGCCAC
GAACGCGGCG CCTTTACCGG CGCGCTCCAG CGCAAGATCG GGCGGATCGA GAGCGCTCAC
GAGGGCACCC TCTTTCTCGA CGAAATCGGC GATATGCCGC ATGAATGCCA GGCGGTCCTG
TTGCGCTTCC TTCAGGAAGG CACGATCGAG CGGCTGGGCG GCAACGGGCC GATCAACGTC
GACGTGCGGG TCATTTCGGC GACCCACGTC GATCTGGACA AAGCCGTCGA AGACGGGCGC
TTCCGCTCCG ACCTGTATCA CCGCTTGTGC GTGCTGCGCC TCGTCGAGCC GCCGTTGCGC
GAGCGCGGCG GCGACATCAA GCTGCTCGCC AACTATGCGC TCAGCATGTA CAAGCAGGAC
GGCGCGCGCA AGCTGCGCGG CCTGTCGAGC GACGCGATCG TCGCCATGTC GAACTATCCG
TGGCCGGGCA ATGTGCGCGA ACTGATCAAC TGCGTGCGGC GTGCCGTGGT GATGAGCGAG
GGCCGTTTCA TCACCGCCGG CGATCTGGGC CTGCCGGAAA CCGAGAACGG GCCGGCCGTG
ACGCTGGCGG AGATCCGCAG CCGGGCCGAA AAGAATGCCA TCGAGCAGGC TTTGCAGCGG
CACGGCTACA AGCTGTCCGA GGCGGCGGCC GAGCTCGGCA TTTCCAGGGC CACGCTGTAT
CGGCTGATGC ACGCCAACCG GCTGCATCAG GACGTGGCGG CCGGACGCGC CTCGAACGCC
AGCGGCGGCG GCGCGGACGC CGATGGCGAG GCGGAGCGGA AGGCGCCTTC GCTGGTGTGA
|
|---|
| Protein sequence | MNTTCTPVDT ERTVLYVSNS PDQKLAAFLA ASGWQAVHAK STAVAERMIE RGNIKVGLVE
LPGDCTSQHL SALASCMRRV ETNWVAQIAP GQAANELVSR FILDYCFDFV TRPWLNERLV
FALGHAHGLS SLRQVEVAPE PSLGRHGMVG QCEAMQQLYR RIDKCGVTNA PVFVAGESGT
GKELTAKAIH ERSPRAGRTF VAINCAAIPP SLLQAELFGH ERGAFTGALQ RKIGRIESAH
EGTLFLDEIG DMPHECQAVL LRFLQEGTIE RLGGNGPINV DVRVISATHV DLDKAVEDGR
FRSDLYHRLC VLRLVEPPLR ERGGDIKLLA NYALSMYKQD GARKLRGLSS DAIVAMSNYP
WPGNVRELIN CVRRAVVMSE GRFITAGDLG LPETENGPAV TLAEIRSRAE KNAIEQALQR
HGYKLSEAAA ELGISRATLY RLMHANRLHQ DVAAGRASNA SGGGADADGE AERKAPSLV
|
|---|
| |