| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1062 |
|---|
| Symbol | |
|---|
| ID | 4008449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2192516 |
|---|
| End bp | 2193175 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637951623 |
|---|
| Product | polar amino acid ABC transporter inner membrane protein |
|---|
| Protein accession | YP_554243 |
|---|
| Protein GI | 91779035 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.0790133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.732766 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATC CTTTCATGAT CATCTGGCAG CAACGCGCGG ACGTGCTTTC CGGTCTGCTC
GACACGCTCG GGCTGCTGGC GATCGCCGCC GTTGCATCGC TCGTCTTCGG CGCATTGCTC
GCGCCTGCGC TGATGTCGAA GCGACCCGCC ATCGCGCGGA TCGCAACGCT TTACGTCGAT
GCGATGCGCT GTGCGCCGTT TCTGCTGTTC GTCTATCTGA TCTACTTCGG CCTGCCCACG
GCGGGCATTC GCCTGTCCAA CTGGTGGGCC GGCGCAATCG CGCTGATTCT CTACAACACA
GCCTACATGG CCGAACTGTT ACGCGGCGCA TGGGCCGGCC TGCCGGCGCC GATGATCGAA
GCGGCGTCCG CCTATGGCTT TCATGGCTTC AGTCTGGTTC GCCGCATCAT CTTGCCGCAG
GTCTTTACCG TCGCATTGCC CATGATCGGC AACCAGCTCG TGCAGATCGT GAAGGACAGC
GCGTTCCTCA CGGTGATCGC GGTCGGCGAA CTGACGCATC AGATGAACGG CATTCAGGCC
ACCTATTTCA TTCCGTTCGC CGCGTTCGCC ACGGCCGTGC TGCTGTACTG GGCCATCTGT
CTCGTGATCG AAGGCGCAAG CGGACTCCTG TCGAGATTTG CCGAGGAACG CAGAGCATGA
|
|---|
| Protein sequence | MIDPFMIIWQ QRADVLSGLL DTLGLLAIAA VASLVFGALL APALMSKRPA IARIATLYVD
AMRCAPFLLF VYLIYFGLPT AGIRLSNWWA GAIALILYNT AYMAELLRGA WAGLPAPMIE
AASAYGFHGF SLVRRIILPQ VFTVALPMIG NQLVQIVKDS AFLTVIAVGE LTHQMNGIQA
TYFIPFAAFA TAVLLYWAIC LVIEGASGLL SRFAEERRA
|
|---|
| |