Gene Bxe_B1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1000 
Symbol 
ID4008511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp2256287 
End bp2257039 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content64% 
IMG OID637951684 
Productbranched chain amino acid ABC transporter ATPase 
Protein accessionYP_554304 
Protein GI91779096 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.308971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.736788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACG TACAGGATCT CTGCGTCCAG TTCGCGGGCC TGAAAGCCGT GCAGGATCTC 
TCCTTCAGCG TGAAGCCGGG ACAGATCATC ACGCTGATGG GACCGAACGG CGCCGGCAAA
TCGACGGCGT TCAATGCGAT CGGCGGAATG ATCCGGCCGA CTTCGGGAAA GGTTCACTTC
GACGGGCGCG ACATTACCGG CGAGCGGCCC GCAAAGGTGG CCGCGTTAGG CATCCGTCGT
ACGTTTCAGA ACAATGGCAT TCTGCGCGAG ATGACGGTGA TCGAGAATGT GCTGACGGGT
CTCGAACTGT CGACGCAGAG CACGTTCTGG GGCGCCGTGA CCGGCATGCC CGGGTCCTCG
CGCGCGGAGC GCGACGCGGT TCGCCGGGCG CGCAGTGCGC TCGAACAGAT GGGCGTGCCC
GAGATCGCCG AACGCATTGC CGGCGACCTG TCGTTCGGGC AGCAGCGGCT CGTCGAAATC
GCTCGCGCGA CAGTGGCGCG GGCACGCATG ATCATGCTCG ATGAACCGGC CGTCGGCCTG
TCTCCCGGCG AGCGCGTGCA CCTTGGCAGC GTGCTCCGCG AACTCGCCGC GAATGGCATG
GCCGTACTGA TGGTCGAGCA TGTGCAGGAT CTGGTGATGG CCGTATCGGA CGAAATCCTG
GTGCTGAACT ACGGCAAGAA AATCGCGCAT TGCGCGCCTT CTGAGATCCG CCACAACCGC
GATGTGCTGG AGGTCTATCT TGGCCGTGCA TGA
 
Protein sequence
MLDVQDLCVQ FAGLKAVQDL SFSVKPGQII TLMGPNGAGK STAFNAIGGM IRPTSGKVHF 
DGRDITGERP AKVAALGIRR TFQNNGILRE MTVIENVLTG LELSTQSTFW GAVTGMPGSS
RAERDAVRRA RSALEQMGVP EIAERIAGDL SFGQQRLVEI ARATVARARM IMLDEPAVGL
SPGERVHLGS VLRELAANGM AVLMVEHVQD LVMAVSDEIL VLNYGKKIAH CAPSEIRHNR
DVLEVYLGRA