Gene Bxe_B0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B0994 
Symbol 
ID4008517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp2261642 
End bp2262820 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content65% 
IMG OID637951690 
Productputative mandelate racemase / muconatelactonizing enzyme 
Protein accessionYP_554310 
Protein GI91779102 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.0973014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.486209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGA GTACTCACCG CATCACCTCT GTCGAAGCAC TGCACGTCGG CCAGTTCCTC 
TACGCCCGGA TCCGCACGGA AGCCGGGCTG ACCGGTTTCG GCGAGGCCGG CTCGTGGGGA
CACATCGAGG CTGCGAAAGC CGCCCTCGAA AAGTTCGGCG AATATCTGGT CGGCAAGGAC
GCCAACCAGA TCGAGCGGCA CTGGAACGTG ATGCAGCGCT TCTCGCATTT TCGTGGCACC
GCGGTCAACG CGGCCGTGTC GGCGATCGAC ATCGCACTCT GGGACCTGCT CGGCAAGCGG
CTGCAGGTTC CCGTGTGGCA ACTGCTCGGC GGCGCATACC GTGACAAGTT GCGCGTATAC
GGCCATGTGT ACGCAGAAAC GCTCGACGAA GTGCTCGCGG ACTGCCGGCG CCTGCGCGCC
GAAGGTTTCA CCGCCATAGG CCATATCAAC CCATTCCTCG ACGAGCCGGA AGGCGATGTC
TACTTCCGCT CCTTTGCCGG CAAGGTGCGC GACGCGAAGG AGCGGGTAAT GGCCTTTCGC
GAGGCAGTGG GACCGGACGT CGATCTGCTG ATCGAAATGC ACCGGCGTCT GAATCCCGCC
GAAGCGATCG CGATCGGCCA GGTGCTGGAG CCGCTCACGC CGATGTGGCT CGAAGACCCG
CTGCGCCCCG AGTTCTACAC GCAGATGACG ACCGTCGGTC ACGCGATCCG CGTGCCCGTC
GCGACCGGCG AACGCTTCAG CACGCCGGCC GAATTCCATC TGCAACTGGC GGGCGGTGGG
GTGCGCTATG CGCGCACGTC GGTCTGCGTA TGCGGCGGGA TCACCGGCGC GAAGAAGATC
GCCGCACTCG CTGAAGCGCA GAACGTCGAC ATCGCACCGC ATAACCCCCT GTCGCCGATC
AGCCTCGCGG CGTGCATGCA GGTGGCCGCT TCAGTGCCGA ACTTTGCGAT CCAGGAATAC
CCGACCGGCT TCGAGAACCT CGTGCTCAAG TCCGGGCAGA ATCTGCTCGG CTCCGATCTC
GTCAAGAATC ATCCGGTGCC GAAGGAAGGC TTCATCACGG TGCCGGACGC GCCGGGTATC
GGCGTCGAAC TGGTGGACGA CGTGGAGCAT CGCCGGGCGC CGTTGCACCG GCCGGTCTCG
ATGCGCAGCA CCATCGACGG CGCGCCGCTC GATCAATGA
 
Protein sequence
MKSSTHRITS VEALHVGQFL YARIRTEAGL TGFGEAGSWG HIEAAKAALE KFGEYLVGKD 
ANQIERHWNV MQRFSHFRGT AVNAAVSAID IALWDLLGKR LQVPVWQLLG GAYRDKLRVY
GHVYAETLDE VLADCRRLRA EGFTAIGHIN PFLDEPEGDV YFRSFAGKVR DAKERVMAFR
EAVGPDVDLL IEMHRRLNPA EAIAIGQVLE PLTPMWLEDP LRPEFYTQMT TVGHAIRVPV
ATGERFSTPA EFHLQLAGGG VRYARTSVCV CGGITGAKKI AALAEAQNVD IAPHNPLSPI
SLAACMQVAA SVPNFAIQEY PTGFENLVLK SGQNLLGSDL VKNHPVPKEG FITVPDAPGI
GVELVDDVEH RRAPLHRPVS MRSTIDGAPL DQ