| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0847 |
|---|
| Symbol | |
|---|
| ID | 4008664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2424506 |
|---|
| End bp | 2425510 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637951837 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_554457 |
|---|
| Protein GI | 91779249 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00307439 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGGC TTCAGGCCAT GCAAGTGTTC ACGCGTGTCG TCGACACCAA CAGCTTTACC
CGTGCAGCGG AGACGCTCGA CCTGCCGCGC GCATCGGTTA CCACGATTAT TCAGAACCTC
GAAGCGTTCC TCGGCACGCG TCTGATGCAT CGGACCACGC GGCGCCTGTC GCTCACACCG
GACGGCGCGG CGTACTACGA ACGCTGCGTG CGCATCCTCG CGGATGTCGA GGAGACCGAG
GCCAGTTTTC AAAGCGGCAA TAAAAAACCG CATGGCAAGC TGCGCATCGA CATGCCGGGG
TCGATTGGCC GCCTGCTGGT GATTCCTTCG CTGAGTGAAT TCCACACGCG CTATCCGGAC
ATCGACCTGC AACTCGGCCT GACGGACCGG CCGGTGGATC TGCTGCAGGA AGGCGTGGAT
TGCGTGGTGC GGGTCGGCGC GCTACAGGAT TCCTCGCTGG TGGCGCGCCG TATTGGGTTG
TTCGAGGGTG TGACCTGCGC GGCCCCCGAT TACATCGAGC GCGCGGGCAT GCCCTCTTCG
CTCGAAGACC TGGAGAATCA CAAAGCAGTC AATTACTTTT CGAGCCGCAC GGGACGCACG
CTCGACTGGG CCTTCATGGT TGATGGCAAA GAAATCGAAG TAAAAATGAA GGGCATCGTC
TCGGTGAATG ACGCCGACGC CTACGTGACC TGCGGGCTGG AAGGCTTCGG CCTGATTCAG
CCTGCGCTCT TCATGGTGCT GCCGCATCTG CGTTCGGGCC AACTGGTGGA AGTACTGCCG
GAGCTGAAAC CTTTGCCGAT GCCGATTTCC GCAGTCTATC CGCACAGCCG CCATCTGTCG
CCTAAAGTCC GTGTTTTCGT AGACTGGATC GCGGAGCTGT TCGACCGCTG CCCATTGCTG
AGCGGACGCG GCAGTCTCGA CGCAACCTGC ACGAAGCGCA CTTTCGAAGA ACGCGAGTCT
GCTCCGACGC TCGACACACC GGTGATATCG GAATGGGTCG CGTGA
|
|---|
| Protein sequence | MDRLQAMQVF TRVVDTNSFT RAAETLDLPR ASVTTIIQNL EAFLGTRLMH RTTRRLSLTP
DGAAYYERCV RILADVEETE ASFQSGNKKP HGKLRIDMPG SIGRLLVIPS LSEFHTRYPD
IDLQLGLTDR PVDLLQEGVD CVVRVGALQD SSLVARRIGL FEGVTCAAPD YIERAGMPSS
LEDLENHKAV NYFSSRTGRT LDWAFMVDGK EIEVKMKGIV SVNDADAYVT CGLEGFGLIQ
PALFMVLPHL RSGQLVEVLP ELKPLPMPIS AVYPHSRHLS PKVRVFVDWI AELFDRCPLL
SGRGSLDATC TKRTFEERES APTLDTPVIS EWVA
|
|---|
| |