Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0733 |
Symbol | |
ID | 4008778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 2549011 |
End bp | 2550315 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637951951 |
Product | Type I secretion outer membrane protein, TolC |
Protein accession | YP_554571 |
Protein GI | 91779363 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAGT TCCGCTTCGC GCGCGTTGCG ATCAGTCTGT TGTGCGCCAT TGCGAGTCCC GCGTTTGCGA CCGACCTTCT CACCGTGACG CAACAGACGC TCGGCCGCGA CTCCAGCTTC GCCCAAGCGC GGGCCGGCTA CGCGGCGGCA CAGCAGGCGG TTCCGCAGGC GCGCGCCGGC CTGCTGCCGC AGATTTCCGC GGGTTGGGGG CGCACCTATA ACAGCATAGC GACAGATGGC TTCCCGAAGA CGACTTACTG GCAGTCGGGA TGGACCATCA ATATCGCGCA GCCGTTGTTC GACTGGACGA AATGGAGCAA CTACCGGCAA GCGGATTTTG TCGAAGCGCG CGGCACGGTC GAAATGAATG CCGCGCAACA GGCTGCGATT CTGCGCGCCG TGCGCGTGTA TTTCGAAGCG CTCGTTGCCG AAGACGAATT GAGGCGCGTC AGCGAATACG CGAGCGCCGT GGATCAGCAA CTTCAATTGA TCAATCGGGG CAAAGCGGGC GGTGAAGCGA CGCTGATCGA TCTGCGCGAC GCCCAGACCG CGCGTGAGAA GGTCGCGCTG GAACAGATGG ATGCGGAAAA TGCCCTGCGT GCGAAGCGCC GGGCGTTCGA GCAAGCCACC GGCGTGCCGT TCGAAACGCT CGCGCGTTTG CCTGACTCGT TGCCGATGCC GCGCCTGCAA CCCGAAGACA TCGATGCGTG GGCCGGCCAG GCCAGGGATC ACGCGTTTGA GGTTCAACTG AAACAACTGG ACTGGCAGAT TGCGAAAATG GAGGTGAGCA AGGCCACGTC GGCGCATCTG CCGTCGGTTT ATCTGACCGG AAGCTATACC CCGGCCGGCG CGGCGTCCGG CTACTCGCGG CCCACCACCA CGACAACGGG TATGCTCGCC ATCTCGATCC CGGTTTTCTC CGGCGGTGAG ACGCAGGCCA AGGTGAAGGC GTCTTCCGCG CTGGAAGACA AGGCGCAAGA AGGCCTTGCA GGCGCGTCGC GCGACGCCGA GACCGCGGCG CGCGACGATT ACAGCCGCTA CCAGTATGGA CGCACGCGAA TCGATCTGCT CACGCACCTC GTGGCCTCTT CGCAGGAGGT GCTGGCGGCA ACCCGGATCG GCTTTCGGGT AGGGAGCCGC ACGGCCAGCG ACGTACTGCG AGCGATCGAT GCGCTTTATT CCTCGCAACG CGATCTGCTG GCCGCCCGCT ACGACGCCAT CGTCGCACTG ATGCAACTCA AAGGCGACAC GGCCGCCCTG AGCATCACCG ACGTGGTCCA GATCAACGAC ATGCTGGTGC ACTGA
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Protein sequence | MFEFRFARVA ISLLCAIASP AFATDLLTVT QQTLGRDSSF AQARAGYAAA QQAVPQARAG LLPQISAGWG RTYNSIATDG FPKTTYWQSG WTINIAQPLF DWTKWSNYRQ ADFVEARGTV EMNAAQQAAI LRAVRVYFEA LVAEDELRRV SEYASAVDQQ LQLINRGKAG GEATLIDLRD AQTAREKVAL EQMDAENALR AKRRAFEQAT GVPFETLARL PDSLPMPRLQ PEDIDAWAGQ ARDHAFEVQL KQLDWQIAKM EVSKATSAHL PSVYLTGSYT PAGAASGYSR PTTTTTGMLA ISIPVFSGGE TQAKVKASSA LEDKAQEGLA GASRDAETAA RDDYSRYQYG RTRIDLLTHL VASSQEVLAA TRIGFRVGSR TASDVLRAID ALYSSQRDLL AARYDAIVAL MQLKGDTAAL SITDVVQIND MLVH
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