| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0628 |
|---|
| Symbol | |
|---|
| ID | 4008883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2676472 |
|---|
| End bp | 2677875 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637952053 |
|---|
| Product | major facilitator superfamily multidrug efflux transporter |
|---|
| Protein accession | YP_554673 |
|---|
| Protein GI | 91779465 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0297622 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTTG CCTTAGGCAC TTTCATTGTT CCGCTGATCG TCGCGTGCGC CATGTTCATG
GAGAATGTGG ACGGCACGGT CATCGTGACG TCGCTGCCGG TTCTGGCGCG CGATCTCGGC
CAGGATCCCA TCACACTCAA GCTCGCTGTA ACGGCCTATG TCATTGGCCT CGGCGTCTTC
ATTCCTATCT GCGGCTGGGT GGCTGACCGT TTCGGTTCGC GTACGGTGTT CCGCACGGCC
ATCGGCGTTT TCATGGCCGG CTCGCTGATG TGCGCGGCCT CCACGTCTCT CGGCACCTTC
GTGGTGGCGC GCTTCGTGCA AGGCATCGGT GGCGCGATGA TGGTGCCGGT GGGCCGCATC
ATCATTTTCC GTTCAGTGCC GAAATCCGAC TTTATCCGCG CGGTCAACTA TCTGACCGTG
CCGGCTTTGC TCGGGCCCGT GGTCGGGCCG CCGCTGGGCG GCTTCATCAC CACGTATCTG
CATTGGCGTC TGATCTTCTT CATCAATATC CCGATCGGCC TGCTGGGAAT CTGGTTGGCG
AACAGGCATA TTGCCAACGT GCGCGAAGCG CATCCGGGCC GGCTCGACTG GACCGGCTTC
GCGTTGTCTG CGAGCGGAGC GTCGCTATTC ATGCTCGGGC TTTCGCTGGT GGGCGGCGAG
TTGGTGTCGA ACACGGTGTC GGTCGGCATG TGCGTGGCCG GCTTGGTGTT ACTCGCGCTG
TACGTGCTGT ACGCGAACCG TGTCGACTTG CCCGTGCTCG ATCTGCGCCT GCTGCGCATT
CCGAGTTTTC ACGCGAGCGT GGTGGGCGGC TCGCTGTTCC GTATCGGTCT CGGAGCCGTG
CCGTTTCTGC TGCCGCTCGC GTTGCAGGAA GGCCTCGGCA TGACCGCGTT CAAGTCGGGA
GCGATCACCT GTGCGTCTGC GTTCGGCTCG ATCTTCATGA AGGCGGCGGC ATCGCGCATT
CTCGAACGGT TCGGTTTCCG TACCGTGCTG ATGTTCAACG CGGGCTGCGC GGGTCTCGCC
ATTGCCGTGT ACGGTCTGTT CTTTCCCGGC ACACCGCACT GGCTGATCTG GTGTGTGGTG
CTGTTCGGCG GCGTCTTTCC GTCGCTTCAG TTCACGTCGT TGAATACGCT CGCGTACGCG
GACATTCCGA GTCGCGACGT TGGCCGTGCG ACGAGCGTGG CGAGCGTGAT CCAGCAGATT
TCGCTGGGCC TCGGCGTGAC GATCGCGGGC ATCGTGCTGC AGATTTCGCA TAACGTGCAG
GGTCATTCCG CTATCGTGTT CTCGGACTTC TGGCCGGCTT TTCTCGTGGT CGGCCTGTTC
TCGTTCATGT CGATTCCCGT CACCGCGCGG CTGCCGCACG GCGCCGGCGA CGAGATTGCG
CGCGGCAGTC GCGGCCGCGC GTGA
|
|---|
| Protein sequence | MPLALGTFIV PLIVACAMFM ENVDGTVIVT SLPVLARDLG QDPITLKLAV TAYVIGLGVF
IPICGWVADR FGSRTVFRTA IGVFMAGSLM CAASTSLGTF VVARFVQGIG GAMMVPVGRI
IIFRSVPKSD FIRAVNYLTV PALLGPVVGP PLGGFITTYL HWRLIFFINI PIGLLGIWLA
NRHIANVREA HPGRLDWTGF ALSASGASLF MLGLSLVGGE LVSNTVSVGM CVAGLVLLAL
YVLYANRVDL PVLDLRLLRI PSFHASVVGG SLFRIGLGAV PFLLPLALQE GLGMTAFKSG
AITCASAFGS IFMKAAASRI LERFGFRTVL MFNAGCAGLA IAVYGLFFPG TPHWLIWCVV
LFGGVFPSLQ FTSLNTLAYA DIPSRDVGRA TSVASVIQQI SLGLGVTIAG IVLQISHNVQ
GHSAIVFSDF WPAFLVVGLF SFMSIPVTAR LPHGAGDEIA RGSRGRA
|
|---|
| |