| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0613 |
|---|
| Symbol | |
|---|
| ID | 4008898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2691314 |
|---|
| End bp | 2691919 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637952068 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_554688 |
|---|
| Protein GI | 91779480 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0886445 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTGTCGTGAT CGGCGCCACC GGCACGCTGG GCCAGGCGGT GAGCGCCGAA
CTGAAGGCGC GTCACGAAGT GATCGAAGTG GGCGCGACAC GCGGCCAGTA TCACGTCGAC
AGTACCGACC CGGCGAGCGT CGAACGGCTA TTTCGCGAGA TCGGCAAAGT GGACGGCATC
GTCACCGCAA CCGGCAAGGT GCATTTCGGT CCGCTGCCCG ACATGAGCGT CGAACAGTTC
TGGGTCGGCC TGCGCGACAA GCTGATGGGA CAAATCAACG TGGTGCTCGC GGCCCAGCAA
TACGTGAACG ACGGCGGCTC GTTCACGCTG ACGAGCGGCA TCATCGGCGA CGAGCCGATT
CTGCAAGGCG CGAGCGCGAC CACCGTCAAT CTGGCGCTCG AAGGTTTCGT GCGCGGCGCG
GCGATCGAAT TACCGCGCGG CATTCGCATC AACGTAGTGA GCCCGACCGT GCTCACCGAA
GCGATGGACG CTTATGCGCC CTACTTCCGC GGCTTCGAGC CGGTGACGGC TCAGCGTGCG
GCAATGGCTT ATCTGCGCAG CGTGGAAGGC GCGCAAACCG GCCGCGTATA TCGCGTGGGT
TATTGA
|
|---|
| Protein sequence | MKKIVVIGAT GTLGQAVSAE LKARHEVIEV GATRGQYHVD STDPASVERL FREIGKVDGI
VTATGKVHFG PLPDMSVEQF WVGLRDKLMG QINVVLAAQQ YVNDGGSFTL TSGIIGDEPI
LQGASATTVN LALEGFVRGA AIELPRGIRI NVVSPTVLTE AMDAYAPYFR GFEPVTAQRA
AMAYLRSVEG AQTGRVYRVG Y
|
|---|
| |