| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0400 |
|---|
| Symbol | |
|---|
| ID | 4009111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2926589 |
|---|
| End bp | 2927293 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637952276 |
|---|
| Product | putative short-chain dehydrogenase, oxidoreductase |
|---|
| Protein accession | YP_554896 |
|---|
| Protein GI | 91779688 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.0465203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACA CACCTTCGCA GAAAACCGTT CTCATTGTCG GTGCCTCCCG CGGCCTTGGA
TTGGCAATGG TCGAGGAATA TCTGAAGCGC GGCTACCGTG TCATCGCCAC CGGGCGAGCC
GCCTCGACAG AAAAGCTTCG GCGGGCCGCC GAAGCCTCTG CCGGCGCGCT CGAAGTGGAA
ACTGTCGATA TCACGGTTCC GGAGCAGGTT GCAGCTTTAC GCGCCCGTCT TGCCGATCGG
CGCATAGACG TGTTGTTTGT GAATGCAGGC GTCAAGAACG ACGACCGTGA AACGATAGCG
GACGTTTCGA CCGAGGAATT CGTGCGGGTG ATGGTAACGA ACTCGCTGAG TCCGATGAGA
GTCATCGAAG CGTTTCAGGA TCTCGTGCCG CCGACGGGAA CTATCGGTGT CATGTCATCG
GGGCAGGGCA GTATCACCAA CGCCACCAAC GCGAATTATG AAGTCTACAG GGGGAGCAAG
GCCGCGCTCA ATATGTTTAT GCGTACGTTC GCGGCCCGCA GCGCCGGGTA TCCGCGGACC
CTTCTGATCA TGGCGCCCGG CTGGGTCCAG ACAGACATGG GTGGTCCTAC GGCGCGCCTG
ACCATTGAAG AAAGCATTCC GAACCTGGTC AACACGATCG AGGCTTATGA AGGACGCGCC
GGCTTGCATT ACCTCGACTA TCTGGGAAAA ACCGTTCCCT GGTGA
|
|---|
| Protein sequence | MQDTPSQKTV LIVGASRGLG LAMVEEYLKR GYRVIATGRA ASTEKLRRAA EASAGALEVE
TVDITVPEQV AALRARLADR RIDVLFVNAG VKNDDRETIA DVSTEEFVRV MVTNSLSPMR
VIEAFQDLVP PTGTIGVMSS GQGSITNATN ANYEVYRGSK AALNMFMRTF AARSAGYPRT
LLIMAPGWVQ TDMGGPTARL TIEESIPNLV NTIEAYEGRA GLHYLDYLGK TVPW
|
|---|
| |