| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0266 |
|---|
| Symbol | |
|---|
| ID | 4009245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 3079581 |
|---|
| End bp | 3080327 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637952410 |
|---|
| Product | putative short-chain dehydrogenase |
|---|
| Protein accession | YP_555030 |
|---|
| Protein GI | 91779822 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGGC TAGCAGGCAA AGTCGCCATT GTCACTGGCG CATCCAAGGG AATCGGGGCA
GCGATCGCGA AGGCGCTCGC TGCGGACGGC GCGAAGGTGG TTGTCAACTA CGCCACTAGC
AAGTCCGGCG CGGACGCGGT GGTTCAAGCC ATTACCGATG CAGGCGGCCA GGCTGTGGCC
ACGCAGGGCG ACGTGTCCAA CAGTGCTCAC GCGAAGCGTC TGGTCGATAC TGCGATTGCC
ACGTATGGAA AGCTCGACAT TCTGGTCAAC AATTCAGGCG TCTACGAGTT CGGTGCCCTG
AACGAAGTCA CGGAAACGCA ATTCCGCAGG ATGTTCGATA TCAACGTGCT TGGTCTGCTG
CTAATGACTC AAGCGGCATC GGCACAACTT GGCGAAGGCG GCAGCATCAT CAACATTGGC
TCGGGCGTTA CCGCCATCAC GCCTCCAGGA ACCGCCGTGT ACACGGCCAC CAAGGGCGCA
GTAGACGTCA TTACCGGCGT GCTCGCCAAG GAGCTCGGCC CGCGCAAGAT CCGGGTCAAT
TCCGTCAACC CGAGCCTCAC TGCAACCGAA GGGACGCAAA GCGCCGGAAT GCTGGCCTCC
GAATTCGAGG CGGGAATCGT TGCGCAGACG CCGTTGGGCC GCCTCGGTCA GCCTCAGGAC
ATCGCCGATG TGGTGGCGTT CGTAGCTTCG GACGATGCGC GCTGGCTCAC CGGCGAGAAA
ATCATCGCCG GCGGCGGACT CCGCTAG
|
|---|
| Protein sequence | MSRLAGKVAI VTGASKGIGA AIAKALAADG AKVVVNYATS KSGADAVVQA ITDAGGQAVA
TQGDVSNSAH AKRLVDTAIA TYGKLDILVN NSGVYEFGAL NEVTETQFRR MFDINVLGLL
LMTQAASAQL GEGGSIINIG SGVTAITPPG TAVYTATKGA VDVITGVLAK ELGPRKIRVN
SVNPSLTATE GTQSAGMLAS EFEAGIVAQT PLGRLGQPQD IADVVAFVAS DDARWLTGEK
IIAGGGLR
|
|---|
| |