| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0079 |
|---|
| Symbol | |
|---|
| ID | 4009432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 3279114 |
|---|
| End bp | 3280028 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637952579 |
|---|
| Product | ABC sugar transporter, inner membrane subunit |
|---|
| Protein accession | YP_555199 |
|---|
| Protein GI | 91779991 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAC CTGATCTATA CAAGGGTTGG CTCGCCAGGC ACTCCGTGCC GGCAGCGGAC
CAGCGCAGCG CGATGCTGCT GCTGCTTCCG ATGTTTGTGG TGCTCTGCGT CGTTGCGGTG
TTCCCAATTG TGTATTCGCT GTGGACAAGC CTGTTCGAGA TCCATCTCAC ACGAATGAGC
ACCACGTTCG TTGGCTTCGG CAATTATCTG CAGATCTTTC GCGATCCGTC GTTCTGGGCC
GCGGCACTTC GCACCGCGGT CTTCACGGTT GGATCGGTCG CCGCGATCAT GGTCATTGCG
ACGTTGATAG CCCTGCTGCT CAACACAGAG TTTCGTGGCC GGCGGGTCCT ATCGACAGCG
TTGCTGATTC CGTGGGCAAT TCCATATGTC GTCGACGGCC TGATGTGGAA GTGGATCTAC
GACTCTGGGT ACGGCGCACT CAACGGTCTG CTACTGCAGC TCGGCCTGAT TCAGCATTCA
ATGGTATGGC TCGGCGACCC TCACAGGACC CTGGCGTTGA TTGCAAATGC GTTCGTCTGG
AAGGAAGTGC CACTCGCGAC CATTCTGCTG CTTGTGACGC TGAAGTCGGT TTCGTCCGAC
CTCTATGCGG CAGCGCGCGT CGATGGCGCG ACACTGTGGC GGCGCTTCGT GCATATAACG
CTGCCGTCAA TGCGTCCCGG TTTCATGCTG GTGATGATCT ACGAAGCGAT GATGGCAGTG
CGGCACTTCG ACCTGTTCTT CATTCTGACA GAAGGCGGCC CGGCCGACGC CTCGCATGTT
GTCTCGTGGC ACATCTATGT CGAAACCTTT CGCAAACTGT CGTTCGGCAC TGGCGCGGCG
GTCGCTTATC TGCTCGCCCT CGCGACCTTT GGCATGTCCT ACGCGATTAT CCGTCTGCTC
GGCAGGAGGC TTTGA
|
|---|
| Protein sequence | MSTPDLYKGW LARHSVPAAD QRSAMLLLLP MFVVLCVVAV FPIVYSLWTS LFEIHLTRMS
TTFVGFGNYL QIFRDPSFWA AALRTAVFTV GSVAAIMVIA TLIALLLNTE FRGRRVLSTA
LLIPWAIPYV VDGLMWKWIY DSGYGALNGL LLQLGLIQHS MVWLGDPHRT LALIANAFVW
KEVPLATILL LVTLKSVSSD LYAAARVDGA TLWRRFVHIT LPSMRPGFML VMIYEAMMAV
RHFDLFFILT EGGPADASHV VSWHIYVETF RKLSFGTGAA VAYLLALATF GMSYAIIRLL
GRRL
|
|---|
| |