| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4501 |
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| Symbol | |
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| ID | 4006431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 4852976 |
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| End bp | 4855420 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637949645 |
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| Product | putative general secretory pathway protein D |
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| Protein accession | YP_560983 |
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| Protein GI | 91785777 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.322148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAC TGCATGACCG TCGGCGGCTA CGGCTGTCGG CATCAATACC CTATTCCATG
AGAAGAAATC GTATGGCTTT GCGTCGCGTC GCAACGGCGC TGCTGGTGGC TGGCTTGATC
ACCGCGCAGA CAGCACAGGC ACAGGTGACA CTCAACTTCG TCAACGCCGA CATCGATCAG
GTAGCCAAGG CGATCGGCGC GGCAACCGGC AAAACGATCA TCGTCGACCC GCGCGTGAAG
GGTCAGTTGA ATCTCGTGTC GGAAAATGCG GTGCCTGAAG ATCAGGCGCT GAAGACCTTG
CAGTCCGCAC TGCGCATGCA GGGCTTCGCG CTGGTGCAGG ATCACGGCGT GCTGAAAGTC
GTGCCCGAGG CCGATGCCAA GCTGCAAGGC GTGCCGACCT ATGTCGGCAA CACGCCTACC
GCGCGTGGCG ACCAGGTGGT CACGCAGGTG TTCGTGCTGA AGAACGAGTC GGCCAACAAT
CTGCTGCCGG TGCTGCGCCC GCTGATCTCG CCGAACAATA CCGTGGCGGC CTACCCTGCC
AACAACACCA TCGTAGTCAC CGACTACGCC GACAACGTGC GGCGCATTGC GCAGATCATC
GCGGGGGTGG ATACGGCGGC GGGCCAGTCG GTGTCAGTGG TGCAGCTGAA GAACGCGAAT
GCGATCGACA TCGCCACGCA ACTCTCCAAG ATGCTCGATC CGGGCTCGAT CGGCAGCACC
GACGCGACGC TGAAGGTTTC GATCACAGCC GATCCGCGCA CCAACTCGCT GCTGATCCGC
GCTTCCAACG GCGCGCGCCT CGCGGCGGCG AAGCAACTGG CGAAGGAACT CGATACGCCC
ACCACGATGC CCGGCAACAT CCACGTGGTG CCGCTGCGTA ACGCGGACGC GACGAGACTC
GCCAAAACCT TGCGTGGTAT GTTCGGCAAA GGCGGCGATA CGGGCTCGTC GGCGAGTTCG
AACGACGCCA ATTCGTTCAA CCAGAATGGC GGCGGCGGTG GGTTGGGCGG CAACAATTCG
ACGGGCACGT CGGGTACGCC GCCGTTGCCT TCGGGTGGTC TGGGCAGCAG TTCGATGGCG
TCGCCGATGG GCGGCGGCGG TGGCTACGGC GCGGGCGGCG GTTCCAATTC CGGCGGCCTG
CTAGGCAACG ACAAGGACAA GGGCGACGAC AATCAGGCGG GCGGCATGAT CCAGGCGGAT
GCCGCGACCA ACTCGCTGAT CGTCACGGCG GCCGAGCCGG TGTACCGCAA CCTGCGGGCG
GTGATCGACC AGCTCGACGC ACGGCGCGCG CAGGTCTATC TCGAGGCGTT GATCGTCGAG
TTGAACTCGA ACACGAGCGG CAACCTCGGT ATTCAGTGGC AGGTCGCGAA CAATTCGATT
TTCGCCGGCA CCAATCTGCA GACCGGCAGC AGCAACAGCA TCGTCAATCT GACGGCGGGC
GCCATCGCGG CCGGGGCAGC CGGTGCGGCC ACCGGTGGTC TCGCTAGCGC GATCGGCACC
CAGGGTCTCC AGCAGGGCCT CAATATCGGC TGGATTCACA ACATTTTCGG TGTGCAGGGA
CTCGGTGCGC TGCTGCAGGC GCTGTCGCAG ACCGCCGACG CGAACGTGCT GTCCACGCCT
AACCTGATTA CGCTCGACAA CGAGGAAGCC AAGATCGTCG TCGGTACCAA CGTGCCGATC
CAGACGGGCT CGTATTCGAA CCTCACGAGC TCGACCGCGA CCTCGGCGTT CAATACGTAC
GATCGCGTGG ACGTGGGCCT GACGCTGCAC GTCAAGCCGC AGATCACCGA CGGCGGCATT
CTCAAGCTGC AGCTCTACAC GGAAGACTCG GCGATCGTGA CCGGCACGAC CAACGCCACC
ACCAACCCGG CGGGCCCGGA ATTCACCAAG CGTTCGATCC AGTCGACAGT GCTCGCCGAT
AACGGCGAGA TCATCGTGCT GGGCGGCCTG ATGCAGGACA ACTACCAGGT CAGCAACAGC
AAGGTGCCGT TGCTCGGCGA CATTCCGTGG ATCGGCCAGC TGTTCCGCTC GGAACAGAAG
ACCCGCAACA AGACCAATCT GATGGTGTTC CTGCGCCCGG TGATCATCAG CGATCGCGGT
ACCGCTCAGG CTGTGACGTC GAATCGTTAT GACTACATTC AGGGCGTACA GGGTGCGTAC
AGGCAGGACA ACAACCTGAT CAAGGACAAT GACGATCCGG TGGTTCCTCC CATGCCGCTC
GGCCCGAGCC AGGGTGCTTC GCCCGAGATG AACCTGTTCG ATCTCGACAA GATGCGCCGT
CAGCAATTGG CGCCGCCGCC GGCTAACGGC GGTGCGGTCA CGAACGGCGC CGCGGCCACT
ACCGGCACTC CCCTGCAGAG CAGCCCTGCC ACCGTCGGGC CTGCCGTGCA GACCAGCCCG
ATTACTGTGT CGCCGTCCAC CGCGTCGCCC GGAGTGCGAC CGTGA
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| Protein sequence | MSALHDRRRL RLSASIPYSM RRNRMALRRV ATALLVAGLI TAQTAQAQVT LNFVNADIDQ
VAKAIGAATG KTIIVDPRVK GQLNLVSENA VPEDQALKTL QSALRMQGFA LVQDHGVLKV
VPEADAKLQG VPTYVGNTPT ARGDQVVTQV FVLKNESANN LLPVLRPLIS PNNTVAAYPA
NNTIVVTDYA DNVRRIAQII AGVDTAAGQS VSVVQLKNAN AIDIATQLSK MLDPGSIGST
DATLKVSITA DPRTNSLLIR ASNGARLAAA KQLAKELDTP TTMPGNIHVV PLRNADATRL
AKTLRGMFGK GGDTGSSASS NDANSFNQNG GGGGLGGNNS TGTSGTPPLP SGGLGSSSMA
SPMGGGGGYG AGGGSNSGGL LGNDKDKGDD NQAGGMIQAD AATNSLIVTA AEPVYRNLRA
VIDQLDARRA QVYLEALIVE LNSNTSGNLG IQWQVANNSI FAGTNLQTGS SNSIVNLTAG
AIAAGAAGAA TGGLASAIGT QGLQQGLNIG WIHNIFGVQG LGALLQALSQ TADANVLSTP
NLITLDNEEA KIVVGTNVPI QTGSYSNLTS STATSAFNTY DRVDVGLTLH VKPQITDGGI
LKLQLYTEDS AIVTGTTNAT TNPAGPEFTK RSIQSTVLAD NGEIIVLGGL MQDNYQVSNS
KVPLLGDIPW IGQLFRSEQK TRNKTNLMVF LRPVIISDRG TAQAVTSNRY DYIQGVQGAY
RQDNNLIKDN DDPVVPPMPL GPSQGASPEM NLFDLDKMRR QQLAPPPANG GAVTNGAAAT
TGTPLQSSPA TVGPAVQTSP ITVSPSTASP GVRP
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