| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4290 |
|---|
| Symbol | |
|---|
| ID | 4004208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 199765 |
|---|
| End bp | 203352 |
|---|
| Gene Length | 3588 bp |
|---|
| Protein Length | 1195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637945360 |
|---|
| Product | 2-oxoacid ferredoxin oxidoreductase |
|---|
| Protein accession | YP_556761 |
|---|
| Protein GI | 91781555 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTC GCCTGCCCAT CGACGGCACG CCCGCACTCG CCGATTACAA GCTGTCCGAC
AACCTCACCG CGACGCGCGG CCGCATCTTC CTGACCGGCA CGCAAGCGCT GGTGCGCCTC
GTGCTCATGC AGCGCGCCGC CGACAAGGCA CGCGGCATGA ACACCGCCGG TTTCATCAGC
GGTTATCGCG GCTCGCCGCT CGGCATGGTC GATCAGCAGT TGTGGAAGGC GAAGAAACTG
CTCGCGGCGA GTGATATCCG CTTCCTGCCC GCCATCAACG AAGAACTCGG CGGCACCGCC
GTACTCGGCA CGCAGCGAGT GGAATCGGAC CCGGAGCGCA CCGTCGAGGG CGTTTTCGCG
ATGTGGTACG GCAAGGGCCC GGGCGTGGAC CGCGCCGGCG ACGCGCTCAA GCACGGCAAC
GCCTACGGCT CGTCGCCGCA CGGCGGCGTG CTGGTGGTGG CGGGCGACGA TCACGGCTGC
GTGTCGTCGT CCATGCCGCA TCAGAGCGAC TTCGCGTTGA TGGCCTGGCA TATGCCGGTC
GTCAATCCGT CGAACATCGC GGACATGCTC GAGTTCGGTT TGTACGGCTG GGAATTGTCG
CGCTTCTCCG GCGCGTGGGT CGGCTACAAG GCGATCTCCG AAACGGTCGA ATCGGGCTCG
ACCGTCGATC TCGACGCGCT GCGCACCGAC TGGGCCGCGC CGCAGGATTT CGAAGCGCCG
GCCGGCGGCC TGCACAATCG CTGGCCGGAT CTGCCGAGCC TGACGATCGA GTCGCGCATG
CATGCGAAGC TCGACGCGGT GCGGCACTTC GCGCGCGTGA ACAGCATCGA CAAATGGATC
GCGCCGAGCC CGCACGCGAA CGTGGGGATC GTGACCTGCG GCAAGGCGCA TCTGGACCTG
ATGGAGACGC TGCGCCGCCT CGATCTGACG GTCGCCGATC TGGAAGCGGC CGGCGTGCGC
ATCTACAAGG TCGGCCTGTC GTTTCCGCTG GAAATGACGC GTATCGATGC GTTCGTCTCC
GGCCTGTCCG AAGTGCTGGT GATCGAGGAG AAAGGCCCGG TCATCGAACA GCAGATCAAG
GACTATCTGT ACAACCGCAC GCAAGGCACG CGGCCGATCG TGGTCGGCAA GAACGCCGAA
GACGGCACGC TGCTGCTGTC GTCGCTCGGG GAATTGCGGC CGTCGCGCAT TCTGCCGGTG
TTCGCCAACT GGCTCGCAAA GCACAAGCCC GCGCTCGATC GCCGCGAACG CGTGGTCGAT
CTGGTCGCGC CGCAAATTCT CTCGAACGCC GCGGACAGCG TGAAGCGCAC GCCGTATTTC
TGCTCGGGCT GCCCGCACAA TACGTCGACG AAAGTGCCTG ACGGGTCGAT CGCGCATGCG
GGGATCGGCT GTCACTTCAT GGCGTCGTGG ATGGAGCGCG ACACGACCGG TCTCATCCAG
ATGGGCGGCG AAGGCGTGGA CTGGGCGTCG CATTCCATGT TCACGAAAAC GCGCCACGTG
TTCCAGAATC TCGGCGACGG CACGTACTTC CATTCCGGCA TTCTGGCGAT CCGCCAGGCG
GTCGCCGCGA AAGCCACCAT CACGTACAAG ATTCTCTATA ACGACGCCGT TGCGATGACG
GGCGGCCAGC CGGTGGACGG CAGCATCTCG GTGCCGCAGA TCGCGCGCCA GGTGGAAGCC
GAAGGGGTGT CGCGCTTCGT CGTGGTCAGC GACGAGCCGG AAAAGTACGA CGGCCATCAC
GACCTCTTTC CGAAGGGCAC CACGTTCCAC CATCGCAGTG AAATGGACAC CGTGCAGCGC
GAATTGCGCG ACACCGACGG CGTGACCGTG CTGATCTACG ACCAGACCTG CGCGGCGGAA
AAACGCCGGC GCCGGAAAAA AGGCGAATTC CCCGATCCGG ACAAGCGTCT TTTCATCAAC
GAGGAAGTCT GCGAAGGCTG CGGCGATTGC GGCGTGCAGT CGAATTGCCT GTCGGTGGAA
CCGGTTGAAA CGGCATTGGG CCGCAAGCGC CGCATCGATC AATCGTCGTG CAACAAAGAC
TACTCGTGCG TGAACGGCTT CTGCCCGAGC TTCGTCACGG TGGAAGGCGG CAAGCTGAAG
AAAGCCGCGG GCGCCGCGTT CGATCCGGCG GCACTCGCCG CGCGCGTCGA CGCGCTGCCG
CTTCCCGCCA CGCATCTCGA CGCCGCGCCG TACGACATTC TGGTGACGGG CGTCGGCGGC
ACGGGCGTCG TGACGGTCGG TGCATTGATC AGCATGGCCG CGCATCTGGA AGGCAAGAGC
GCGTCGGTGC TCGACTTCAT GGGCTTCGCG CAAAAGGGCG GGGCGGTGCT CTCGTTCGTG
CGGTTCGCCG CGCGCGACGA GTGGCTCAAC CAGGTGCGTA TCGACACGCA ACAGGCCGAC
GTGCTGCTCG CCTGCGACAT GGTGGTCGGC GCGAGCGCCG ATGCGCTGCA AACGGTACGT
CATGGCCGCA CGCGCATTGT CGTGAACACG CACGCGATTC CGAACGCGAC GTTCGTGACG
AATCCGGACG CAACGCTGCA CGCCGACGCG CTGCTCGACA AGATGCGTCA CGCGGCCGGC
GCCGAACGCA TGTCGACGTG CGACGCGCAG GCGCTCGCCA CGCGCTTTCT CGGCGACACC
ATCGGCGCGA ACATTCTGAT GCTCGGTTAT GCCTGGCAAC TCGGTCTGGT GCCGGTCTCG
TTCGGCGCGA TGATGCGTGC GATCGAGTTG AACAACGTCG CGGTGCCGAT GAACCAGCTC
GCGTTTTCGA TCGGCCGCCT CGCTGCCGAA GATCCGGCCG CGCTCGAATC GCTGTGGCAA
GCACGGCATC AGGCGAAGCA GCCTGTGCGC GTCGATACGC TCGACGAACT GATCGCACAC
CGCGAAGGGC GTCTCCAGAT TTACGGCGGC GCGAGCTACG TGAAGCGCTA TCGCGCGCTG
GTCGATGCGG CACGCCGCGC GGAAACCGCC GCGGATGCGA ACAGCGAGCG CGTGACGCGC
GCGGTGGCGA CCACGTTCTA TCGCCTGCTC GCGGTGAAGG ACGAATACGA AGTGGCGCGC
CTGCATACCG ACGCCGCATT CCGTGAAGCA CTGGAAGCGC AATTCGAAGG CGTGGCCGGC
AAGGACTTCG GCATCAAGTT CAATCTCGCG CCGCCCACGC TCACGCGCCC GGAACCCGGC
AAGAATCCGG CCAAGAAAAC CTTCGGTCAA TGGATGTGGC CGGTGCTTGG CACGCTGGCG
AAATTCCGCG CTCTGCGCGG CACGCCACTC GATCCGTTCG GCCGCACGCT GGAGCGCAAG
ATGGAGCGCG AACTCGCCGG CGACTACGAA ACCACGTTGC AGCGTGCGCT CGCGAAGCTC
GGCGCCGACA ACCTCGAAGA CGTGGCGAAG CTGGCCGATC TGCACGCCCG TGTACGTGGC
TATGGTCACG TGAAACTCGC GAATCTGGCG GGTGTGAAGC GTGGCGAGCG CGACCTCGCC
GCACGCCTGC GGATCGAAGC GGCAACGGGC GAGTCGGTGC GCAAATCGCT GGAAGAGGTG
AAAGGCGCGG GACAGTTGCG CGGGATTCCG GTGGTCGTGG CGAAGTAG
|
|---|
| Protein sequence | MTARLPIDGT PALADYKLSD NLTATRGRIF LTGTQALVRL VLMQRAADKA RGMNTAGFIS
GYRGSPLGMV DQQLWKAKKL LAASDIRFLP AINEELGGTA VLGTQRVESD PERTVEGVFA
MWYGKGPGVD RAGDALKHGN AYGSSPHGGV LVVAGDDHGC VSSSMPHQSD FALMAWHMPV
VNPSNIADML EFGLYGWELS RFSGAWVGYK AISETVESGS TVDLDALRTD WAAPQDFEAP
AGGLHNRWPD LPSLTIESRM HAKLDAVRHF ARVNSIDKWI APSPHANVGI VTCGKAHLDL
METLRRLDLT VADLEAAGVR IYKVGLSFPL EMTRIDAFVS GLSEVLVIEE KGPVIEQQIK
DYLYNRTQGT RPIVVGKNAE DGTLLLSSLG ELRPSRILPV FANWLAKHKP ALDRRERVVD
LVAPQILSNA ADSVKRTPYF CSGCPHNTST KVPDGSIAHA GIGCHFMASW MERDTTGLIQ
MGGEGVDWAS HSMFTKTRHV FQNLGDGTYF HSGILAIRQA VAAKATITYK ILYNDAVAMT
GGQPVDGSIS VPQIARQVEA EGVSRFVVVS DEPEKYDGHH DLFPKGTTFH HRSEMDTVQR
ELRDTDGVTV LIYDQTCAAE KRRRRKKGEF PDPDKRLFIN EEVCEGCGDC GVQSNCLSVE
PVETALGRKR RIDQSSCNKD YSCVNGFCPS FVTVEGGKLK KAAGAAFDPA ALAARVDALP
LPATHLDAAP YDILVTGVGG TGVVTVGALI SMAAHLEGKS ASVLDFMGFA QKGGAVLSFV
RFAARDEWLN QVRIDTQQAD VLLACDMVVG ASADALQTVR HGRTRIVVNT HAIPNATFVT
NPDATLHADA LLDKMRHAAG AERMSTCDAQ ALATRFLGDT IGANILMLGY AWQLGLVPVS
FGAMMRAIEL NNVAVPMNQL AFSIGRLAAE DPAALESLWQ ARHQAKQPVR VDTLDELIAH
REGRLQIYGG ASYVKRYRAL VDAARRAETA ADANSERVTR AVATTFYRLL AVKDEYEVAR
LHTDAAFREA LEAQFEGVAG KDFGIKFNLA PPTLTRPEPG KNPAKKTFGQ WMWPVLGTLA
KFRALRGTPL DPFGRTLERK MERELAGDYE TTLQRALAKL GADNLEDVAK LADLHARVRG
YGHVKLANLA GVKRGERDLA ARLRIEAATG ESVRKSLEEV KGAGQLRGIP VVVAK
|
|---|
| |