| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4260 |
|---|
| Symbol | |
|---|
| ID | 4003947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 235834 |
|---|
| End bp | 237123 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637945391 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_556792 |
|---|
| Protein GI | 91781586 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.241726 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTTCA GCAAGGTTCT GACGAAGTGT GCGGTGATCT GTGCAGCGGC TACGTGCATG
GTCACGCTCG CGCACGCCGA CCCGCTCACC GACACCCAGG CGGGACCGTT GACCCGCGCG
CGCGTGCCGC GCATCGCGCT CGACGACGAC GTGTACCTGC CCACCGCAGG TCTCAACGAA
CAGATCATCC GCGTGCCGGT CGACGCTGCC GGCACGGTCA CCCTCGAAAC GACGATCTAC
AAGCCGGACG GCGCGGGCCC GTTTCCGATG ATCGTTTTCA ACCACGGCAA GATTCCCGGC
GACCCGCGCA GTCAGGAGCG CAGCGACCCG CTGCCGTTCG CACGCGAGTT CGTGCGCCGC
GGTTACGTGG TGGTGGCGCC CAACCGCCAG GGTTTCGGCC ACTCGGACGG CGTTTATCAG
CAGGACGGTT GCGACGTTGA AAAGAACGGC ATCGGCCAGG CCGGCGACGT TGCCGCCACG
ATCGACTTCA TGTCGAAGCA GCCTTACGTG GACGCCACCC ACATCGTGGT GGCCGGCACC
TCGCACGGCG GCCTGGCGAC GATGGCGTAC GGCACGGAAG CCGCGCCGGG CGTGCGGGCG
CTGATCAATT TCTCGGGCGG TTTGCGGCAG GATGCCTGCA GCGACTGGCA GGGCAATCTG
ACGCGCGCAT TCGGCGCATA TGGCGAGAAG ACCAGGGTGC CGTCGCTGTG GATGTATGGC
GATAACGATT CGGTCTGGAA CGCGCCGCTG GTGGCGGGCA TGTATGCCGC GTATGGTGCG
CATGGCGCGA GCGCGAAGAT GGTGGATTTC GGTAGCTACA AGAACGACGC GCACCGGCTG
GTCGGCGACC GTGACGGCGT GCATGTGTGG TGGCCGGCTG TCGAGGCTTT CCTTGCGCGT
GTGGGCATGC CGACTGGCGT GCAGTATCGC GTGGCGGATC CTTCCATGCC GAAGGCGAGC
GGGTTTGCCG CCGTCGATGC GGTCGACTCC GTGCCGTTTG TCGATGAAGC CGGACGCAAT
GGGTATCGGA ATTTCTTGCA TCAGTATCCT AGCCGGGCGT TTGCTGTGTC TGATACGGGG
GCCTGGTCGT GGGCTGAAGG TGGCGATGAT CCGATGTCGG TTGCTGTGGC TAATTGCCAG
AAGCAGAGTT CGGCGCCTTG CCGGTTGTAT GCGGTGAATA ATTCGGTTGT TTGGGGGGAG
CAGTCTTCGC AGACGGCTGA GGGGGGTGCG GGTGCGGGCT CGGGCGCGGG TGGCGTCGAT
GGGCGGCGGG ATGTTGCCAG TCGGGAGTGA
|
|---|
| Protein sequence | MVFSKVLTKC AVICAAATCM VTLAHADPLT DTQAGPLTRA RVPRIALDDD VYLPTAGLNE
QIIRVPVDAA GTVTLETTIY KPDGAGPFPM IVFNHGKIPG DPRSQERSDP LPFAREFVRR
GYVVVAPNRQ GFGHSDGVYQ QDGCDVEKNG IGQAGDVAAT IDFMSKQPYV DATHIVVAGT
SHGGLATMAY GTEAAPGVRA LINFSGGLRQ DACSDWQGNL TRAFGAYGEK TRVPSLWMYG
DNDSVWNAPL VAGMYAAYGA HGASAKMVDF GSYKNDAHRL VGDRDGVHVW WPAVEAFLAR
VGMPTGVQYR VADPSMPKAS GFAAVDAVDS VPFVDEAGRN GYRNFLHQYP SRAFAVSDTG
AWSWAEGGDD PMSVAVANCQ KQSSAPCRLY AVNNSVVWGE QSSQTAEGGA GAGSGAGGVD
GRRDVASRE
|
|---|
| |