| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4243 |
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| Symbol | |
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| ID | 4004023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 254162 |
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| End bp | 256879 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637945408 |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_556809 |
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| Protein GI | 91781603 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.16214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC ACACCTTGCG CCTTGCCGGC CTCGAGCCGT TCAACGTCAC GTCCGGGACG
CTCTTCATCA ACGTGGGCGA ACGCACCAAC GTGACCGGCT CGAAGGCGTT TGCGCGAATG
ATCCTGAACG ACCAGTTCGA CGATGCGATC GCGGTCGCGC GCCAGCAGGT CGAAAACGGC
GCGCAGATCA TCGACGTCAA CATGGACGAA GCGATGCTCG ATTCGAAAGC GGCGATGGTG
CGCTTCATGA ATCTGATCGC GTCGGAACCG GATATCGCGC GCGTGCCGAT CATGATCGAC
TCGTCGAAGT GGGAAGTGAT CGAAGCGGGC CTGAAGTGCG TGCAGGGCAA GGCCATCGTC
AACTCGATCT CGCTGAAGGA AGGCGAAGAA GCGTTCCGCC ACCACGCGAA CCTGATTCGC
CGCTACGGCG CGGCCGCCGT GGTGATGGCC TTCGACGAAC AGGGCCAGGC CGACACCTTC
GAGCGCAAGA CGCAGATCTG CAAGCGCTCG TATGACTTCC TCGTCAACGA AGTCGGCTTC
CCGCCGGAAG ACATCATCTT CGATCCGAAC ATCTTCGCGA TCGCGACCGG CATCGAAGAG
CACAACAACT ACGCGGTCGA CTTCATCAAC GCAACGCGCT GGATCAAGCA GAATCTGCCG
TACGCGAAGG TGAGCGGCGG CGTGTCCAAC GTGTCGTTCT CGTTTCGCGG CAATGATCCG
GTGCGCGAAG CGATCCACAC CGTGTTCCTC TACCACGCGA TCCAGGCGGG CATGGACATG
GGCATCGTCA ACGCGGGCCA GCTCGGCGTG TATGCCGACC TCGATCCGGA GTTGCGCGAA
CGCGTGGAAG ACGTCGTGCT GAACCGCCGT GAAGACGGCA CCGACCGGCT GCTCGAAATC
GCCGACAAGT TCAAGACCGG CGCCGCGAAG AAGGAAGAGA ATCTGGAGTG GCGCAACCAG
CCGGTCGAAA AACGTCTGTC GCATGCGCTC GTGCATGGCA TCACCAACTT CATCGTCGAA
GACACCGAGG AAGTGCGTGC GAAGATCGCC GCCGAAGGCG GCCGTCCGAT CAATGTGATC
GAAGGCCCGC TGATGGACGG CATGAACATC GTCGGCGACC TGTTCGGGCA GGGCAAGATG
TTCCTGCCGC AAGTGGTGAA GTCGGCGCGC GTCATGAAGC AGGCGGTCGC GCATCTGATT
CCGTATATCG AGGAAGAGAA GAAGCAGCTC GCCGAAGCCG GCGCCGACGT GCGTGCGAAG
GGCAAGATCG TCATCGCCAC GGTGAAGGGC GACGTGCACG ATATCGGCAA GAACATCGTC
TCCGTGGTGC TTCAGTGCAA TAACTTCGAA GTGGTCAACA TGGGCGTGAT GGTCTCGTGC
AACGACATTC TCGCCAAGGC GAAGGTCGAA GGCGCGGACA TCATCGGGCT CTCCGGGTTG
ATCACGCCGA GCCTCGAAGA GATGGCGTAC GTCGCATCGG AAATGCAGCG CGACGACTAC
TTCCGCATCA AGAAGATTCC GCTGCTGATC GGCGGCGCCA CCACCTCGCG CGTGCACACC
GCGGTGAAGA TCGCGCCGCA TTACGAAGGG CCGGTGGTCT ACGTGCCGGA CGCGTCGCGC
TCGGTTTCCG TCGCGTCGAG CCTGCTGTCC GACGAGGGCG CGGCGAAGTA CCTCGACGAA
CTCAAGTCCG ATTACGACCG GATCCGCGAC CAGCACGCCA ACAAGAAAGC ACTGCCTATG
GTCACGCTGG CCGAAGCCCG CGCCAACAAG ACCAGGGTCG ACTGGGCGAG CTATCAGCCG
GTCAAGCCGA AGTTCATCGG CCGCCGCGTG TTCAGGAACT TCGATCTGGC CGAACTGGCG
ACCTATATCG ACTGGGGTCC GTTCTTCCAG ACGTGGGACC TGGCGGGCCC CTATCCGGCC
ATCCTGAACG ACGAGATCGT CGGCGAATCG GCGCGGCGCG TGTTCTCGGA CGGCAAGTCG
ATGCTCGCGC GTCTGATCCA GGGCCGCTGG CTCCAGGCGA ACGGCGTGAT CGCGCTACTG
CCCGCCAACA CGGTGAACGA CGACGACATC GAAATCTACA CGGACGAATC GCGCTCGGAA
GTCGCGCTCA CGTGGCGCAA TCTGCGCCAG CAAAGCGTGC GTCCGGTGGT GGACGGCGTG
ATGCGGCCGA ACCGGTCGCT CGCTGACTTC ATCGCGCCGA AAGACTCGGG CGTGGCCGAC
TACATCGGCA TGTTCGCGGT GACGGCGGGA CTCGGCGTCG ACGTGAAGGA AAAGCAGTTC
GAAAAAGATC ACGACGACTA CAGCGCGATC ATGCTGAAGG CGCTCGCCGA CCGTTTCGCC
GAAGCCTTCG CCGAAGCGCT GCACGCCCGC GTGCGGCGCG ACCTGTGGGG TTACGCAAAT
GACGAAACGC TCTCCACCGA CGAACTGATC GCGGAAAAGT ACCGCGGCAT CCGTCCGGCG
CCCGGCTATC CGGCCTGCCC GGATCACCTG GTGAAGCGCG ACATGTTCAA TGTGCTGCAC
GCCACCGAAA TCGGCATGAG CGTGACCGAA TCGCTGGCCA TGCTGCCGGC GGCGAGCGTC
TCCGGCTTCT ATCTGGCACA TCCGGACAGC ACCTATTTCT CGGTCGGCAA GATCGGCCAG
GACCAGCTGG AAGACTACGC GAGGCGCATG TCGCTCTCGA AAACGGATGC GGAGCGAGCC
CTCGCGCCTT TGCTGTAA
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| Protein sequence | MTDHTLRLAG LEPFNVTSGT LFINVGERTN VTGSKAFARM ILNDQFDDAI AVARQQVENG
AQIIDVNMDE AMLDSKAAMV RFMNLIASEP DIARVPIMID SSKWEVIEAG LKCVQGKAIV
NSISLKEGEE AFRHHANLIR RYGAAAVVMA FDEQGQADTF ERKTQICKRS YDFLVNEVGF
PPEDIIFDPN IFAIATGIEE HNNYAVDFIN ATRWIKQNLP YAKVSGGVSN VSFSFRGNDP
VREAIHTVFL YHAIQAGMDM GIVNAGQLGV YADLDPELRE RVEDVVLNRR EDGTDRLLEI
ADKFKTGAAK KEENLEWRNQ PVEKRLSHAL VHGITNFIVE DTEEVRAKIA AEGGRPINVI
EGPLMDGMNI VGDLFGQGKM FLPQVVKSAR VMKQAVAHLI PYIEEEKKQL AEAGADVRAK
GKIVIATVKG DVHDIGKNIV SVVLQCNNFE VVNMGVMVSC NDILAKAKVE GADIIGLSGL
ITPSLEEMAY VASEMQRDDY FRIKKIPLLI GGATTSRVHT AVKIAPHYEG PVVYVPDASR
SVSVASSLLS DEGAAKYLDE LKSDYDRIRD QHANKKALPM VTLAEARANK TRVDWASYQP
VKPKFIGRRV FRNFDLAELA TYIDWGPFFQ TWDLAGPYPA ILNDEIVGES ARRVFSDGKS
MLARLIQGRW LQANGVIALL PANTVNDDDI EIYTDESRSE VALTWRNLRQ QSVRPVVDGV
MRPNRSLADF IAPKDSGVAD YIGMFAVTAG LGVDVKEKQF EKDHDDYSAI MLKALADRFA
EAFAEALHAR VRRDLWGYAN DETLSTDELI AEKYRGIRPA PGYPACPDHL VKRDMFNVLH
ATEIGMSVTE SLAMLPAASV SGFYLAHPDS TYFSVGKIGQ DQLEDYARRM SLSKTDAERA
LAPLL
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