| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4124 |
|---|
| Symbol | |
|---|
| ID | 4003438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 372648 |
|---|
| End bp | 373163 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637945528 |
|---|
| Product | PTS IIA-like nitrogen-regulatory protein PtsN |
|---|
| Protein accession | YP_556928 |
|---|
| Protein GI | 91781722 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
|---|
| TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGCC ACTCAAACGC CCCAGCGAGG AGAACCCAGG CCACGTTTTC GCCTGTCAAC
ATGAATCGTT TAGCCAAATT TCTTCCCCTC GAGAACGTCG TCGTCGGACT ATCGGTCACC
AGCAAGAAAC GCGTGTTCGA GCAAGCGGGC CTGATCTTCG AGAACCAGAA CGGCATAGCC
CGTAGCACGG TCACTGACAA TCTGTTCGCG CGTGAGCGCC TCGGATCGAC AGGCCTTGGC
GAAGGCGTGG CGATTCCGCA TGGCCGGATC AAAGGCTTGA AGCAGCCGCT CGCCGCGTTC
GTCCGCCTTG CCGAACCCAT CCCCTTCGAA TCGCCCGACG GTCAGCCGGT CTCGCTGCTC
ATCTTCCTGC TCGTGCCTGA ACAGGCCACT CAGCAACACC TCGAAATCCT TTCGGAAATC
GCCCAGTTGC TGTCCGATCG CGAAACCCGC GAGCGCCTGC ACACGGAACA GGACCGCGAA
ACGTTGCATC GCCTGCTCAC TCAGTGGCAA CCTTGA
|
|---|
| Protein sequence | MERHSNAPAR RTQATFSPVN MNRLAKFLPL ENVVVGLSVT SKKRVFEQAG LIFENQNGIA
RSTVTDNLFA RERLGSTGLG EGVAIPHGRI KGLKQPLAAF VRLAEPIPFE SPDGQPVSLL
IFLLVPEQAT QQHLEILSEI AQLLSDRETR ERLHTEQDRE TLHRLLTQWQ P
|
|---|
| |