| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4120 |
|---|
| Symbol | |
|---|
| ID | 4005032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 376568 |
|---|
| End bp | 377239 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637945532 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_556932 |
|---|
| Protein GI | 91781726 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAT CGTTCCCCCG TTTTGACACC GGCCGCTCGC GCTCCCTGTC CGCGTGCCGC
GCCGGACTCG CCGCGCTGAT CGTCGCGTTG CCGCTCGCCG GCTTCGCGCC GCTCGCGCAC
GCGGACCGTG CCGACAAGGA CAAGCCGCTG AACATTGAAG CGGACAACAT GACTTACGAC
GACCTCAAGC AGGTCAACAT CTTCACCGGC CATGTGGTCG CGACCAAAGG CACGATCGTG
ATCAAGGCCG AACGCGTCGA AGTGACGCAA GACCCGCAGG GCTATCAGTA CGCCACCGGC
ACGTCGAGCG GCGGCAATCT GTCGTATTTC CGCCAGAAGC GCGAAGGCCT CGACGAATAC
ATCGAAGGCA CGGCCGTTCG GATCGACTAC GACGGCAAGC AGGATCTGAC CACGCTCACC
ACCAACGCCA CGGTGAAACG CCTGCAAGGC CTCTCCACGG TGATGGACCA GGTGCACGGC
AGCGTCATTA CCTATGACGG CCAGAGCGAC TTCTATACCG CGAAGGCAGG CAAGGACGTC
GCCGGCCCGG GCAATCCCAC GGGTCGCGTG CGCGCCATGC TGGCGCCGCG CAATGGCGGC
GCTGCGCCGC TGAACGGCGC GCCGGCCACG CTCGCGCCGT CCACGACGAT CCAGGGAGCG
CCGAACCAGT GA
|
|---|
| Protein sequence | MNESFPRFDT GRSRSLSACR AGLAALIVAL PLAGFAPLAH ADRADKDKPL NIEADNMTYD
DLKQVNIFTG HVVATKGTIV IKAERVEVTQ DPQGYQYATG TSSGGNLSYF RQKREGLDEY
IEGTAVRIDY DGKQDLTTLT TNATVKRLQG LSTVMDQVHG SVITYDGQSD FYTAKAGKDV
AGPGNPTGRV RAMLAPRNGG AAPLNGAPAT LAPSTTIQGA PNQ
|
|---|
| |