| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3447 |
|---|
| Symbol | |
|---|
| ID | 4001991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 1123190 |
|---|
| End bp | 1124107 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637946191 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_557590 |
|---|
| Protein GI | 91782384 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.800287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGTT TCGAAGCGAT GGAGATATTT ACGCGTGTGG TCGAGGCGAA CAGCTTCACC
AAAGTATCCG AGTCGCTCGA CCTGCCGCGC GCCAAAGTCA GCCGCACCAT CCAGGCGCTG
GAGGAACACG TCGGCGTGCG TCTGCTGAAC CGTTCGACGC GCCAGGTCAG CGTCACCGAA
GACGGCGCGC TGTTCTACGA GCGCTGCGTG CGCATCCTCG CCGAAGTCGC CGAGGCCGAG
TCGTCGCTGT CGAACAAGCG CGAAAATCCG GCCGGCACGA TCCGCGTGGA TACGTCCGGC
ACGCTGGCCC GCGCGCTGCT GCTGCCCGCG CTCGACGACT TCTACCGGCA ATACCCCGAG
ATCGACGTGC GGCTCGGCCT CGCCGATCGC AACATCGACC TGATTCAGGA CGGCGTGGAT
TGCGTGATCC GCATGGGCAC GCCGGAAGAG TCGAGTCTCG TGGCGCGGCG GATCGGTCAG
GCGCGCATCG TCACATGCGC GTCGCCGGCG TATCTGGAGA AATACGGCGA GCCGACCACG
CTCGAAGCGT TGAGCGAACA TCGCGCGGTC AATTACGTGT CCGCGCGCAC GGGCAGAACG
TTTCCATTCG AATACGAAGT GGACGGCGAA CTCGCCAAGG TCACGCTGAA AAGCGTGCTG
GCGGTAAACG ACGGCTCCGT GTACATCGGC GCGGCCGTGC TCGGTCACGG CATCATCCAG
CCGTCGCGCT TCATGGTCTC CGACCTGATC AACCAGGGCG CGCTGAAGGA AATCCTCACC
ACCTACACGA GCCCCGGCAC GCCGCTATCG GTGCTCTACG CGCATCGCCG CAATCTGAGT
TCGCGGCTGC GCGCGTTCAT CGAATGGGTG ACCGAGCTGG CGCGCAACAA TCCGGATCTG
CATATTGCGG AGCAGTGA
|
|---|
| Protein sequence | MDRFEAMEIF TRVVEANSFT KVSESLDLPR AKVSRTIQAL EEHVGVRLLN RSTRQVSVTE
DGALFYERCV RILAEVAEAE SSLSNKRENP AGTIRVDTSG TLARALLLPA LDDFYRQYPE
IDVRLGLADR NIDLIQDGVD CVIRMGTPEE SSLVARRIGQ ARIVTCASPA YLEKYGEPTT
LEALSEHRAV NYVSARTGRT FPFEYEVDGE LAKVTLKSVL AVNDGSVYIG AAVLGHGIIQ
PSRFMVSDLI NQGALKEILT TYTSPGTPLS VLYAHRRNLS SRLRAFIEWV TELARNNPDL
HIAEQ
|
|---|
| |