| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3307 |
|---|
| Symbol | |
|---|
| ID | 4002364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 1280899 |
|---|
| End bp | 1282779 |
|---|
| Gene Length | 1881 bp |
|---|
| Protein Length | 626 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637946331 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_557728 |
|---|
| Protein GI | 91782522 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAC TCATCGAAGA CTATGCGCTC GTCGGCGACG GCCACACGGC CGCGCTCATC
TCCCGCGAAG GTTCCATCGA CTGGCTCTGC TGGCCGCGCT TCGACTCCGG CGCCTGCTTC
GCCGCCCTGC TCGGCACGCC CGACAACGGC CGCTGGCTGA TCTCGCCCGT CTCGGACACG
CCGCCAACCG TCACCCGCAA CTACCGGGGC GAAACGCTGA TCCTCGAAAC CCATTTCGAA
ACGCCCGAGG GCGCCGTCAC GCTGATCGAT TTCATGCCGC CGGGCAACGG CTGGTCGGAA
CTGGTGCGGG TGGTGGTCGG CAAACGCGGC ACGGTGCGCA TGAAGATGGA ACTGGTGCTG
CGCTTCGATT ACGGCTTCTC GATTCCCTGG GTTGACCGCC TCAAGCACGA TAGCGGCATC
AAGGCGATCG TCGGACCGGA CACCGCCGTA TTGCGCACGC CGGTCCAGTT GCGTGGCGAG
GACATGAAGA CGGTCGCTGA ATTCACCGTT AGCGAAGGCG AGCGCGTACC GTTTTCGCTG
GCCTATTCGC CCTCGCATCT GCGTATTCCG CCGGCGCGCG ACCCGCATAC GTCGCTGGCG
CGCACGGAAA ACTACTGGCT CGAGTGGTCG GCGCGCGGCA CGGTGGAAGG ACGCTGGGCC
GAGCCGATCC GCCGTTCGCT GATCACGCTC AAGGCACTTG CCTACGAGCC GACCGGCGGC
ATCGTCGCCG CGCCCACGAC CTCGCTGCCG GAGCAGCTCG GCGGCACCCG CAACTGGGAT
TACCGCTACT GCTGGCTGCG CGACGCCACG ATCACGCTGC TCGCGATGAT GCGCGGCGGC
TACTTCGACG AAGCACGCGC ATGGCGCTCG TGGCTCGGCC GCGTGACGGC CGGCGCGCCC
GATCAGTTGC AGATCATGTA CGGCATAGCG GGCGAGCGGC GTTTGCCCGA GTTCGAGCTC
GACTGGCTGC CGGGGTATCA GGACGCGAAA CCGGTGCGCG TCGGCAATAA CGCGGTCGGC
CAGCGCCAGC TCGACGTCTA CGGCGAAGTG ATGAATGCGC TGCATCTCGC GCGGGTCGGC
GGCCTGCAGG CGGACGACAC CGCGTGGAAC GTGCAATGCG CGCTCCTCGC CCATCTCGAC
ACGATCTGGC GGGAGCCCGA CGAAGGCATC TGGGAAACAC GCGGCGGCCG CCAGCACTTC
ACCTTCTCGA AGGTGATGGC GTGGGTCGCC TACGACCGCG CGATCAGATC GGCGGAAATG
TTCAAGCTCG ACGGCCCGCT CGACGAATGG CGCACCACCC GCGCGCAAAT CCACGCGGAA
GTCTGCGAAA AAGCGTGGAA TCCCGAGCTC AACGCGTTCT CGCAGTGCTA CGGCACCGAC
CAGCTCGATG CGAGCGTGCT GTTGATGCCG CTGGTGGGGT TTCTGCCGCC GCGCGACCCG
CGCGTGAAAG GCACGGTAGC GGCGATCGAG AGGGACCTGA TGAGCGACGG ATTCGTGATG
CGCTATCGCA CCACCGAATA CGACGACGGC CTGCCGCCTG GGGAAGGCAC GTTTCTCGCG
TGCTCGTTCT GGATGGTGGA CAACCTGGCG TTGCAAGGCC GCCTCGACGA AGCAATCGCG
ATGTACGAAC GGCTCCTCGC GCTGTGCAAC GACGTCGGTT TGCTCGCGGA AGAGTACGAT
CCGGGTGCGA GGCGGCTGGT CGGCAATTTC CCGCAGGCGT TTTCGCACGT GGCGCTCGTG
CATACCGGCC TGAACCTGAT GAAACACGAA CAGGCGATGG CGCAGGCGAC CGGGCAACCG
CCCCATAACG GCGCCGGACC CACCGAACTT GATGCTGCGG CAACCCCGGA TAGCGGCGCG
GCAACATCGC CAGTAGCATG A
|
|---|
| Protein sequence | MPALIEDYAL VGDGHTAALI SREGSIDWLC WPRFDSGACF AALLGTPDNG RWLISPVSDT
PPTVTRNYRG ETLILETHFE TPEGAVTLID FMPPGNGWSE LVRVVVGKRG TVRMKMELVL
RFDYGFSIPW VDRLKHDSGI KAIVGPDTAV LRTPVQLRGE DMKTVAEFTV SEGERVPFSL
AYSPSHLRIP PARDPHTSLA RTENYWLEWS ARGTVEGRWA EPIRRSLITL KALAYEPTGG
IVAAPTTSLP EQLGGTRNWD YRYCWLRDAT ITLLAMMRGG YFDEARAWRS WLGRVTAGAP
DQLQIMYGIA GERRLPEFEL DWLPGYQDAK PVRVGNNAVG QRQLDVYGEV MNALHLARVG
GLQADDTAWN VQCALLAHLD TIWREPDEGI WETRGGRQHF TFSKVMAWVA YDRAIRSAEM
FKLDGPLDEW RTTRAQIHAE VCEKAWNPEL NAFSQCYGTD QLDASVLLMP LVGFLPPRDP
RVKGTVAAIE RDLMSDGFVM RYRTTEYDDG LPPGEGTFLA CSFWMVDNLA LQGRLDEAIA
MYERLLALCN DVGLLAEEYD PGARRLVGNF PQAFSHVALV HTGLNLMKHE QAMAQATGQP
PHNGAGPTEL DAAATPDSGA ATSPVA
|
|---|
| |