| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2985 |
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| Symbol | |
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| ID | 4004691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 1619039 |
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| End bp | 1622245 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637946656 |
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| Product | RND family hydrophobe/amphiphile efflux pump |
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| Protein accession | YP_558046 |
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| Protein GI | 91782840 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.684616 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCATTTT TCTTCATCGA CCGCCCGGTC TTCGCATGGA TCGTCGCGCT CGCCATTGTC
GTGGCGGGCG CGCTGGCTAT TCCGCAACTG CCGGTGTCGC AGTATCCGCG TCTTGCGCCG
CCGCGCATCG TGATCTCCGC CACGTATCCG GGTGCTTCGA CCGAAGTCGT GGACGCCAAC
GTCGGCAGCA TCATCGAGGA AAGTCTCGAT GGCGCCGACA ATATGCTGTA CTACGAAACG
ACGAGCGACA GCCTGGGTGA ACTCGAAATC GACGCGACCT TCGCGCCCGG CACCAATCCC
GATCTCGCGC TGGTGGACAT TCAGAACCGG CTCAAGCAGG TCGAGCCGCG CTTGCCGCAG
CAGGTCGTGC AGCAGGGCAT CAGCGTGTTC AAGGCGGCCA ACACGTTCCT GATGCTGGTG
GCGCTCACCT CCACGGACGG CACGCGCGAC TCCGTGCAAT TGAGCGATTA CCTGAGCCGC
TACGTGTTGC GCGAACTGAA GCGCGCGCCA GGCGTGGGCT CGGCCCAGCT CTGGGACGCG
GACGAAGCGC TGCGCATCTG GCTCGATCCG ATGAAGCTGC GCGAATACGG CCTCGGCGCC
GCCGAAGTGA ACGCCGCCAT TGCCGCGCAG AATGCGACCG TCACGGCCGG AACGCTGGGT
GACGCGCCGT TCGTGCCGGG CCAGCAACTC ACCGCCTCGG TAAGCGTGAA AGGGCAATTG
ATCTCGCCGG CCGAATTTGG CCAGATCGTG CTGAAGGCGC GGCCGGACGG TTCGGCCGTG
CGCCTGCGCG ACGTCGCGCG GGTCGAAGTC GGGCGCGACA ATTACTCGTT CTATTCGCGC
CTGAACGGCA AGGCCGCGGC GACGGTCGGG ATTCAACTCG GGCCGCGCGG CAATGCGCTC
GAAACGTCGA ATGCGATTCG TGCGCGGCTT GCCGCGTTGT CGAAAGGATT GCCGTCGGGC
GTCTCCATCG AGATCCCGTT CGACAACGCG CATTTCGTGC AGATTGCAAT TCACGAGGTG
CTCGTCACGC TCGCGGAAGC GGTGGTGCTG GTGTTCTTCG TCATGTGGTT GTTCCTGCGC
GATCTGCGCT ACACGCTGGT GCCGACCGTG GTGATTCCGG TCACGCTGAT GGGCGCGTTT
CTCGCCATGT ACGCGTGCGG TCTGTCGATC AACGTGTTCA CCCTGTTCGG CCTCGTGCTC
GCCATCGGGA TTCTCGTCGA CGACGCGATC GTGGTGGTGG AGAGCGTGCA CCGCGTGATG
GAAGAAGAGG GCCTGCCGCC ACGCGAGGCT ACCCGCAAGG CGATGTCGCA GATCGGCGGG
GCGATCGTCG GCGTGACCGC GGTGTTGACG GCCGTGTTCG TGCCAATGGC GTTTTTCCCC
GGCGGTGTGG GCGGTATTTA CCGGCAGTTC GCGGTGGCCA TGATCGCGTC GATGCTGGTG
TCGTCGTTCA TGGCCTTGTC GCTGACGCCC GCGTTGTGCG CAAATCTGCT GAAGGCGCAC
ACGCAGTCGG TGCGTCAACG TGATGCGCGC CGCGGCGTTC TGGGTTTCGC GGCGCGCGCG
GCAAGCCGCT TCACATCCGG TTTCGATCGT GCGGCGCGTG GCTATCGCGG CTTGACCGCG
CGCACGCTGC GCCGCATCGG CCCGATGCTG GCGGTCTACG CGGTGCTGGT CGGCGTGTGC
GGTCTGCTCT ACTGGCAGAT GCCCGGCGGT TTTCTGCCGA GCGAGGACCA AGGCCAGTTG
CAGGTAATGG TGCAATTGCC CGCGGGCGCC ACCCAGGCAC GCACGCTGGC CGTGGTGGAG
CGCGTGGAAA AGATTCTGCA TGCGGAGCCC GCCATCGCCA ACGTGACGAG TGTGATTGGC
TGGAGCTTTT CGGGCAGCGG TCAGAACGTG GCAATGGGCT TTGTCGAACT CAAGGACTGG
GGCAAGCGCG ACGTCGACGC ACTCGCTCTG CGCGACCGGC TCAATGCAAA GTTCGACAGG
ATTCTGGATG GCAACGTGGA GGCGCAATTA CCGCCTTCGG TGCCGGGCGT CGGGCACTCG
GACGGTTTCG TGTTCCGTCT GGAGGATCGC GGCGGCGTGG GGCTCGACGC GCTGAAGGCC
GCGCGCGAGC AACTGTTCAC GCAGGCCAGG GCGAGTCCGG TGCTGGCGTC CGTGCATTCC
GAGGACCTGC CCGACGCGCC GCGCGTCGAG CTGATCGTCG ACCGTGCAAA AGCGTATGCG
CTCGGCGTGT CGTTCGATCG TATCGCCGAC GTGCTGGGCA GCACCTTCGG CTCGACCTAT
ATCGACGATT TCCCCGCCGG TGGCCGCATG CGTCGCGTGA TGATCGCCGC CGACGCCGCC
ACGCGCATGA CCGAAGACGA CCTGCTGGCG CTCGCGGTGC CCAACGCGAC GGGCGGCATG
GTGCCGCTCT CGGCCATCGC GACGCGCCAG TGGACGATCG GCCCGGTGAT GCTGACACGC
TACAACGGTT ATCCGTCGCT CGACGTGAGC GGTCACGCGG CGCCCGGCTA CAGTTCCGGC
GCGGCGATGG CGGAGATGGA GCGGCTCGCC GCTGCGTTGC CGGTCGGCGT GCAGTACGAC
TGGGTGGACG CGGCGCGCGA GGAAACCGCG GCCGCGAAAC TCACGCCGCT GCTGATCGGC
CTTTCGTTAT TGGCGGTCTT CATGGCGCTG GCGGCGCTCT ATGAAAGCTG GACGATCCCG
TTGGCCGTGC TGATGGTCGT GCCGCTCGGC GTGATCGGCG CGGTCGCCGC GGTGCTGTTG
CGCGGCATGC CCAACGACGT GTACTTCAAG GTCGGCATGA TCACGGTGAT CGGCCTCGCG
GCGAAGAACG CGATCCTGAT CGTGCAGTTC GCCCGCGATC TGCATCAGCG TGGCCTGCCG
TTGACGCGTG CGGTGGCCGA AGCCGCAGGC GCGCGCTTCC GGCCGATCGT GATGACCTCG
GCGGCGTTTC TGCTCGGCGT CGTGCCGCTG GTGGTGTCGA GCGGCGCGGG CGCCGAAAGC
CGTCGCTCGA TCGGCACCGG CGTATTCGGC GGCGTGCTGG CAGCCACGCT GTTCGGGCTG
GTATTCGCGC CGGTCGCATT CCATGCGGTC GCGTCGCTCA CGCACGGCCG GCGCCGGCTT
GCGCAACTGC ATCGCAAGCG CGAGGAGCGG CGGTTGCGCC GTGCCACGAT CGAACGCGCG
CCGCTCGACG AATCGCCGAC GGCCTGA
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| Protein sequence | MPFFFIDRPV FAWIVALAIV VAGALAIPQL PVSQYPRLAP PRIVISATYP GASTEVVDAN
VGSIIEESLD GADNMLYYET TSDSLGELEI DATFAPGTNP DLALVDIQNR LKQVEPRLPQ
QVVQQGISVF KAANTFLMLV ALTSTDGTRD SVQLSDYLSR YVLRELKRAP GVGSAQLWDA
DEALRIWLDP MKLREYGLGA AEVNAAIAAQ NATVTAGTLG DAPFVPGQQL TASVSVKGQL
ISPAEFGQIV LKARPDGSAV RLRDVARVEV GRDNYSFYSR LNGKAAATVG IQLGPRGNAL
ETSNAIRARL AALSKGLPSG VSIEIPFDNA HFVQIAIHEV LVTLAEAVVL VFFVMWLFLR
DLRYTLVPTV VIPVTLMGAF LAMYACGLSI NVFTLFGLVL AIGILVDDAI VVVESVHRVM
EEEGLPPREA TRKAMSQIGG AIVGVTAVLT AVFVPMAFFP GGVGGIYRQF AVAMIASMLV
SSFMALSLTP ALCANLLKAH TQSVRQRDAR RGVLGFAARA ASRFTSGFDR AARGYRGLTA
RTLRRIGPML AVYAVLVGVC GLLYWQMPGG FLPSEDQGQL QVMVQLPAGA TQARTLAVVE
RVEKILHAEP AIANVTSVIG WSFSGSGQNV AMGFVELKDW GKRDVDALAL RDRLNAKFDR
ILDGNVEAQL PPSVPGVGHS DGFVFRLEDR GGVGLDALKA AREQLFTQAR ASPVLASVHS
EDLPDAPRVE LIVDRAKAYA LGVSFDRIAD VLGSTFGSTY IDDFPAGGRM RRVMIAADAA
TRMTEDDLLA LAVPNATGGM VPLSAIATRQ WTIGPVMLTR YNGYPSLDVS GHAAPGYSSG
AAMAEMERLA AALPVGVQYD WVDAAREETA AAKLTPLLIG LSLLAVFMAL AALYESWTIP
LAVLMVVPLG VIGAVAAVLL RGMPNDVYFK VGMITVIGLA AKNAILIVQF ARDLHQRGLP
LTRAVAEAAG ARFRPIVMTS AAFLLGVVPL VVSSGAGAES RRSIGTGVFG GVLAATLFGL
VFAPVAFHAV ASLTHGRRRL AQLHRKREER RLRRATIERA PLDESPTA
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