Gene Bxe_A1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A1987 
Symbol 
ID4004370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp2731606 
End bp2732910 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content63% 
IMG OID637947650 
Productalpha-ketoglutarate/proton symporter 
Protein accessionYP_559031 
Protein GI91783825 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00883] metabolite-proton symporter 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.057402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.55373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATC TCAATATTCC AATGGCAGTT TCCACGAACG ACACCCGGCG CCGCATCTAC 
GCGATTGTCG GCGCTTCATC GGGCAATCTC GTCGAGTGGT TCGACTTTTA CGTGTATTCG
TTCTGCGCGC TGTACTTCGC GCCGGCGTTC TTCCCGAGCG GCAACCCGAC CACGCAGCTG
CTCAACACCG CGGGCGTGTT TGCCGCCGGC TTCCTGATGC GCCCGATCGG CGGCTGGTTC
TTCGGCCGCC TTGCCGACAA GCACGGGCGG CGCACCGCGA TGATGGTGTC GGTGTTCATG
ATGTGCGGCG GCTCGCTGGT GATCGCGGTG CTTCCTACTT ACGCGCAGAT CGGCGCGCTG
GCGCCGGCGC TGCTGCTGCT CGCGCGGCTG TTCCAGGGGC TGTCGGTGGG CGGTGAATAC
GGCACCAGTG CGACCTATAT GAGTGAAGTC GCGCTCAAGG GCCGGCGCGG TTTCTTCGCG
TCGTTCCAGT ACGTCACGCT GATCGGCGGG CAGTTGTTCG CGCTGCTGGT ACTGGTGATC
CTGCAACAAT TGTTGACCAC TGAAGAACTG AAGGCATGGG GTTGGCGCGT GCCGTTCGTG
ATCGGCGCGC TCTCCGCAGT GGTTGCGCTG TATCTGCGGC GCTCGCTGGA GGAAACCACC
ACGGCCGAAA CACGCCATCG CAAGGAAGCC GGCACGCTGC GCGGCCTGTG GCTGCACAAG
GGCGCGTTCA TGACGGTGCT CGGCTTCACG GCCGGGGGTT CGCTGATTTT CTACACGTTC
ACCACCTACA TGCAGAAGTA CCTGGTCAAC ACGGCGGGCA TGCACGCGAA GACGGCGAGC
AACGTGATGA CCGCGGCGCT GTTCGTCTAC ATGCTGATGC AGCCGGCATT CGGTGCGTTG
TCGGACCGCA TCGGCCGGCG CCGCTCGATG CTGTTCTTCG GGTTCTTCGC AACCATCGGC
ACGGTGCCGT TGCTGCACGC GCTGAAAGAC GTGACGAGCC CGTATGCGGC GTTCGGCCTG
GTGGTGGCGG CGCTGGCGAT CGTCAGTTTC TACACGTCGA TCAGCGGCCT GATCAAGGCG
GAGATGTTCC CGCCGGAAGT GCGCGCGCTC GGCGTGGGGT TGTCGTATGC GGTGGCCAAT
GCGATTTTCG GCGGCTCGGC GGAATATGTC GCGCTGTGGC TGAAGCAGGC GGGCAGCGAG
TCCACGTTCT ACTGGTACGT GACGGCCATG TGCGCAATCG CCGGCGTCGT AGCGTTCCTC
ATGCGTGACC CGTCGAAAGA AGGGTATCTG CGGCACGAAC CGTGA
 
Protein sequence
MTNLNIPMAV STNDTRRRIY AIVGASSGNL VEWFDFYVYS FCALYFAPAF FPSGNPTTQL 
LNTAGVFAAG FLMRPIGGWF FGRLADKHGR RTAMMVSVFM MCGGSLVIAV LPTYAQIGAL
APALLLLARL FQGLSVGGEY GTSATYMSEV ALKGRRGFFA SFQYVTLIGG QLFALLVLVI
LQQLLTTEEL KAWGWRVPFV IGALSAVVAL YLRRSLEETT TAETRHRKEA GTLRGLWLHK
GAFMTVLGFT AGGSLIFYTF TTYMQKYLVN TAGMHAKTAS NVMTAALFVY MLMQPAFGAL
SDRIGRRRSM LFFGFFATIG TVPLLHALKD VTSPYAAFGL VVAALAIVSF YTSISGLIKA
EMFPPEVRAL GVGLSYAVAN AIFGGSAEYV ALWLKQAGSE STFYWYVTAM CAIAGVVAFL
MRDPSKEGYL RHEP