Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1781 |
Symbol | |
ID | 4004862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 2945263 |
End bp | 2947446 |
Gene Length | 2184 bp |
Protein Length | 727 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637947847 |
Product | putative plasmid stabilization protein |
Protein accession | YP_559228 |
Protein GI | 91784022 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.901173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAACCC AACCCGAAAC CACCGATCGT GGTGCTGCCG AATCAACCGC CTTGCTCGAA ACCCACTTTG GCAACGAACA ACCCATCGTG ACCGTACCGT ATTCCAGCCT GCGGTGCTCA CCGCTCAATG CGCGCACGCA GCCGCTGTCC GGCATTCCCG GTCTCGCCTC CAATATCCTT GCGAAGGGCC TGCTGCAAAA TCTCGTCGTT CATGAAATGA AAGGATCACG CGGCAAGCAA CGCCGGTATG GTGTCTGCGC GGGCCAGCGC CGCGAGGCCG CGCTTGACCT GCTATTCGAG CAGAAGCACA TCGCCGCCGA CTATCCGGTG CCCGTGCGGA TCGTGAGTGA AGGCGAGGCG CTCGCGATTT CACTGATCGA GAACAGCGAG CGTGAAGGAC TCGACCCGTT CGACGTGTTG CGCTCCTACC GGATGCTGGC TGAGGAAGGC CGCAGCATCG ATTACATCGC CGCGCTCTTT TCGGCTTCAC CGCTCACGGT CAGGCGGCGC ATGAAGCTCG CCAGCGTGTC CCCGAAGCTG CTCGCGCTAC TGCGTGAGGA CGGCATTACC CTCGACCAGC TTGCTGCGCT CGCACTGGCC GATGATCACG AAACGCAGGA GCGCGTCTGG TTCGATGCGC CGAACGACTG GCAGCGCGCG TCGCAGTATC TCCGTCAGGC GATCACGCGA GCCGAGATTG ACGTGAGCCG CAGCCGTCTG GTGCGCTTCG TCGGACTCGC CGCCTACGAG ACGGCGGGCG GCTTTGTCCG GCGCGACCTG TTCAGCGACA CTGAAAATGC CGGATTCATC GCCGACACGG AACTGTTGCA ACGTCTGGCG GGCGAAAAAC TCGAAACCGT GGCAGGGGAA GTCCGCGCAG AGGGGTGGAA CTGGACCGAA ACGCGCATCG AGCGTGACGT ACTCGAACTG AACCACTACG ACAGGCTCGC TCCGATCGAC CGCGCGTATA CCGAGGATGA GCAGCGCGAA ATGGATGTCC TGACCGCACG GCAGGACGCG CTCGCGAAAC AGTACGACGC ACTTTCGGAG GATGATGAAA ACGCCTATGA GGAAGGCGAA CGGATCGAAA CCGAACTGAA CACCGTCACC GCCGCGATTC AGGCGCTCGA AATGCGCACG CAGGCATGGA GCACGCAGCA GATGGCCGAA GCCGGTGCGT TCATCATCCT CGACCCGCAA GGCGACCTTG TCATCGAGCG CGGGTTGGTA CGCCATGACA GCAATGCCGC GCGGGGCATG GGTGCAGCGA CAACCGGGCA CGCCGTTGCC ACACTCAAGG AGGCGAACCC GAAGTCCCCA CCGGTTCACA GCGCAAAGCT CTGCCAGCGT CTGAGCGCCC ATCGCACCGC CGCCATCCAT GCGGAACTGA TCGCGCAACC GTCCGTCGCG CTCGCGGCGC TGCTGTTCCG GCTCGCGCCG GTCGCTTTCC CCGAGCGGTA TAGTGTCGTG TCGAGCCGGG AGTGTCTGGA ACTCAACGCG ACCAGCAACC ACGATGCGCT GCTGAAGGCC GCCGACGATC TGTCCGCCAG CACCGCATGG GGCATCATCG GCGCACAGCG CCAGCAGTGG CTCGCGGCCC TCCCCAGGAA TCTCGCCGAT CTGCTGCCGT GGCTGATCGA GCAGGATGCT GGCACGACGC TGCTGGACCT GCTCGCCTTC TGCACCGGCA CCCTGCTCGA CGGCGTGACC GGCACGGAAG GCCCCCACGC CCTCAACGCT CTGAGCAACG CGCTACAGCT CGACATGACC CGATACTGGA CGGCAACCCG CGCCTCGTAT TTTGACCACG TCAGCAAGGC ACGCATCGTG GACGTCGCCA TGCAGGCGGT CTCGCCCAGG ATTGCCCTTG ACCTCAGCAA GATGAAAAAA GGCGATGCCG CCGCTGCTGC CGAACTGCGG CTGGCAAAGT CCGCATGGCT CCCGGATGTC CTCACCGATC GGGAAGTTCC GCCGATCCGG GCCCTCGGCG CGATGAACGC CCCGGACGAT GAGGCTGACG GGGATGAAGC GGAAAACGCA CAGGTCGCCA ATGCGGACGA AGCCAGGGCA CCGGAAACTG ACGCTCCGGC TGACACGGCC CATGAGAAGG AAAACCACCC GGCGTGGCCC TTCCCGACCG CCGCCAGCAT AGCGAATGCC GAAACCACGC AACACACCGC GTGA
|
Protein sequence | MQTQPETTDR GAAESTALLE THFGNEQPIV TVPYSSLRCS PLNARTQPLS GIPGLASNIL AKGLLQNLVV HEMKGSRGKQ RRYGVCAGQR REAALDLLFE QKHIAADYPV PVRIVSEGEA LAISLIENSE REGLDPFDVL RSYRMLAEEG RSIDYIAALF SASPLTVRRR MKLASVSPKL LALLREDGIT LDQLAALALA DDHETQERVW FDAPNDWQRA SQYLRQAITR AEIDVSRSRL VRFVGLAAYE TAGGFVRRDL FSDTENAGFI ADTELLQRLA GEKLETVAGE VRAEGWNWTE TRIERDVLEL NHYDRLAPID RAYTEDEQRE MDVLTARQDA LAKQYDALSE DDENAYEEGE RIETELNTVT AAIQALEMRT QAWSTQQMAE AGAFIILDPQ GDLVIERGLV RHDSNAARGM GAATTGHAVA TLKEANPKSP PVHSAKLCQR LSAHRTAAIH AELIAQPSVA LAALLFRLAP VAFPERYSVV SSRECLELNA TSNHDALLKA ADDLSASTAW GIIGAQRQQW LAALPRNLAD LLPWLIEQDA GTTLLDLLAF CTGTLLDGVT GTEGPHALNA LSNALQLDMT RYWTATRASY FDHVSKARIV DVAMQAVSPR IALDLSKMKK GDAAAAAELR LAKSAWLPDV LTDREVPPIR ALGAMNAPDD EADGDEAENA QVANADEARA PETDAPADTA HEKENHPAWP FPTAASIANA ETTQHTA
|
| |