| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0565 |
|---|
| Symbol | |
|---|
| ID | 4005846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 4261140 |
|---|
| End bp | 4263128 |
|---|
| Gene Length | 1989 bp |
|---|
| Protein Length | 662 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637949065 |
|---|
| Product | transketolase |
|---|
| Protein accession | YP_560420 |
|---|
| Protein GI | 91785214 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0021] Transketolase |
|---|
| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.776236 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACG CAATCCGCGC GCTGTCCATG GACGCCGTTC AAAAAGCGAA CTCCGGCCAC
CCCGGCATGC CAATGGGCAT GGCCGAAATC GGCGTGGCGT TGTGGTCGCG TCATCTGCGC
CACAACCCGA AGAACCCGCA ATGGGCCGAT CGCGACCGTT TCGTGCTGTC GAACGGTCAC
GGCTCGATGC TGCTGTACTC GCTGCTGCAC CTGACCGGCT ACGATCTGCC GATCGAAGAG
CTGAAGAACT TCCGCCAGAT GCATTCGAAG ACGCCGGGCC ACCCGGAATA CGGCATCACG
CCGGGCGTCG AGACGACCAC CGGCCCGCTC GGCCAGGGTC TGGCGAATGC GGTCGGCATG
GCGCTCGCCG AGTCGCTGCT CGCCACCGAA TTCAACAAGC CTGACGCAAC GATCGTCGAC
CACCACACGT ACGTGTTCGT CGGCGACGGC TGCCTGATGG AAGGCATCTC GCACGAAGCC
TGTTCGCTCG CGGGCGTGCT GAAGCTGAAC AAGCTGATTG CGTTCTACGA CGACAACGGC
ATCTCGATCG ACGGCGAAGT GGTGCACTGG TTCCACGACG ACACGCCCAA GCGCTTCGAG
GCGTACGGCT GGAACGTGAT CCCGAACGTG GTCGGCCACG ACGTCGAAGC AGTGGACGCG
GCCATCAAGC AGGCGAAGCA ATCCGACAAA CCCACGCTGA TCTGCTGCAA GACGGTGATC
GGCGAAGGCT CGCCGAACAA GGCCGGCAGC CACGATTCGC ACGGCGCGGC GCTCGGCGAC
AAGGAAGTCG CGGCCACGCG CGAAAAGATC GGCTGGAAGT GGGAGCCGTT CGTGATCCCG
CAAGAGGTCT ATGCAGCTTG GGACGCAACA GAAGCGGGCG CACGCAACGA ATCCGAGTGG
GACAAGGCAT TCGCCGCGTA CGCTGCCAAA TATCCGCAGG AAGCCGCTGA ATTCAAGCGC
CGCAACGCGA AGCAGTTGCC GGCGGACTGG AAGGAAAAGG CCAAGGCGAT CATTGCCGGC
GCGAACGAGC GCGCGGAAAC CGTAGCGACG CGCAAGGCAT CGCAACAGGC TATCGAGGCT
TTGTCGGCCG TGCTGCCGGA ACTGCTCGGC GGCTCCGCCG ACCTGACCGG CTCGAACCTG
ACCAACTGGA AGGCCGCCAA ACCGGTACGC GTGAACGCCG AAGGCAAGGC TGCCGGCAAC
TACGTCAACT ACGGCGTGCG TGAATTCGGC ATGAGCGCCG CGATCAACGG CGTTGCGCTG
CACGGTGGCT TCAAGGCGTT CGGCGGCACG TTCCTGACGT TCTCGGACTA CAGCCGCAAC
GCGCTGCGCG TCGCCGCGCT GATGAAAGCG CCGTCGATCT TCGTGTTCAC GCACGACTCG
ATCGGTCTGG GCGAAGACGG CCCGACCCAC CAGTCGATCG AACATGTTGC GAGCCTGCGT
CTGATTCCGC ACCTGCAAGT GTGGCGTCCG GCTGATACCG TCGAGACGGC GGTGGCCTGG
ACCCACGCGG TCGAACATCA TGGCCCGTCG TGCCTGATCT TCAGCCGTCA GAACCTGCCG
TTCTCGGAGC GCACGGACGC GCAGATCGCC AACATCGAGA AGGGCGGTTA CGTGCTGCGC
GACTGGAACG ACGAGATCGT CGCGCGCAAG ATCATCCTGA TCGCCACCGG TTCGGAAGTC
GAACTGGCGC TGAACGCGGT CGAGCCGCTG GCGCGCGAAG GTATCGCGGC GCGCGTCGTG
TCCATGCCGT CAACCACCGT GTTCGACAAG CAGGACGCCG AGTACCGTGA ACGCGTGCTG
CCGCAAGGCG TGCGCCGCGT CGCGATCGAA GCGGGTGTGA CGGATTTCTG GCGCAAGTAC
GTGGGTCTGG AAGGCGGCGT GGTCGGCATC GACACGTTCG GCGAATCGGC CCCGGCTGGC
GTGCTGTTCA AGCATTTCGG CTTCACCGTC GAACACGTGG TAGAGACGGC AAAAGCCGCA
CTCGGCTGA
|
|---|
| Protein sequence | MANAIRALSM DAVQKANSGH PGMPMGMAEI GVALWSRHLR HNPKNPQWAD RDRFVLSNGH
GSMLLYSLLH LTGYDLPIEE LKNFRQMHSK TPGHPEYGIT PGVETTTGPL GQGLANAVGM
ALAESLLATE FNKPDATIVD HHTYVFVGDG CLMEGISHEA CSLAGVLKLN KLIAFYDDNG
ISIDGEVVHW FHDDTPKRFE AYGWNVIPNV VGHDVEAVDA AIKQAKQSDK PTLICCKTVI
GEGSPNKAGS HDSHGAALGD KEVAATREKI GWKWEPFVIP QEVYAAWDAT EAGARNESEW
DKAFAAYAAK YPQEAAEFKR RNAKQLPADW KEKAKAIIAG ANERAETVAT RKASQQAIEA
LSAVLPELLG GSADLTGSNL TNWKAAKPVR VNAEGKAAGN YVNYGVREFG MSAAINGVAL
HGGFKAFGGT FLTFSDYSRN ALRVAALMKA PSIFVFTHDS IGLGEDGPTH QSIEHVASLR
LIPHLQVWRP ADTVETAVAW THAVEHHGPS CLIFSRQNLP FSERTDAQIA NIEKGGYVLR
DWNDEIVARK IILIATGSEV ELALNAVEPL AREGIAARVV SMPSTTVFDK QDAEYRERVL
PQGVRRVAIE AGVTDFWRKY VGLEGGVVGI DTFGESAPAG VLFKHFGFTV EHVVETAKAA
LG
|
|---|
| |