| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0557 |
|---|
| Symbol | |
|---|
| ID | 4005854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 4268106 |
|---|
| End bp | 4270445 |
|---|
| Gene Length | 2340 bp |
|---|
| Protein Length | 779 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637949073 |
|---|
| Product | malic enzyme |
|---|
| Protein accession | YP_560428 |
|---|
| Protein GI | 91785222 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
|---|
| TIGRFAM ID | [TIGR00651] phosphate acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.214152 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCGA ACGTCTATTC TAATCTGCCC TTCGAAGCCC GCCTTATGTC GACTCCCGTC
AATAGCAAAC TCCGCGAAGC CGCCCTCGAT TACCACGAGT TCCCCACCCC CGGGAAGATC
GCGATCGCCC CGACCAAGCA GATGATCAAC CAGCGCGACC TGGCGCTGGC GTACTCGCCG
GGCGTGGCGT TCGCGTGCGA GGAAATCGTC GAAAACCCGC TGAACGCCGC GCGTTTCACC
GCGCGCAGCA ACCTGGTCGG CGTGGTCACC AACGGCACCG CGGTGCTGGG TCTGGGCAAC
ATCGGGCCGC TCGCCTCGAA GCCGGTCATG GAAGGCAAGG CCGTGCTGTT CAAGAAGTTC
GCCGGCATCG ACGTGTTCGA TATCGAGCTG AACGAGTCCG ACCCGCACAA GCTGGTCGAC
GTGATCGCGG CGCTGGAGCC GACCTTCGGC GGCATCAACC TCGAAGACAT CAAGGCGCCG
GACTGTTTCA TCGTCGAGCG CGAATGCCGC AAGCGCATGA AGATTCCGGT CTTCCACGAC
GACCAGCACG GCACCGCGAT CGTCGTCGCG GCGGCCATCA CCAATGGTCT GAAGGTGGTC
GGCAAGGACA TCAGGGAGGT CAAGCTGGTG TCCTCCGGCG CGGGCGCGGC GGCGCTGGCC
TGTCTGGACC TGCTGGTCGA CATCGGCCTG CCGCTGGAGA ACATCACCGT CACCGATCTG
GCCGGCGTGG TCTACAAGGG CCGTGTCGAA CTGATGGACC CGGACAAGGA GCGCTTCGCG
CGTGAAACCG ACGCCCGCAC GCTTGCCGAA GCCATCGGCG GCGCGGACGT TTTTCTCGGC
CTCTCCGCCG GCGGCGTGCT CAAGCAGGAC ATGGTCAAAC AGATGGCGGA CAAGCCGCTG
ATTCTGGCGC TGGCCAACCC GACACCGGAA ATCCTGCCGG AACTGGCGCT CGAAGTGCGC
CCGGATGCGG TGCTGTGCAC GGGCCGCACC GACTATCCGA ACCAGGTGAA CAACGTGCTG
GTGTTCCCGT TCCTGTTCCG CGGCGCGCTG GACGCGGGCG CGACCACGGT GACGCGGGAA
ATGGAAATCG CGGCGGTCAA TGCGATCGCC GAACTGGCGC GCCAGGAACA GAGCGATATC
GTCGCGACGG CGTATGGCAT TCAGGATCTC TCGTTCGGCC CGGAGTATCT GATTCCGAAG
CCGTTCGATC CGCGCCTGAT CGTCAAGGTC GCGCCGGCGG TGGCGCAGGC CGCGATGGAT
TCGGGCGTCG CCGAGCGGCC GATCGAGGAC ATGGACGCGT ACGAACAGCA TCTGCAGCAG
TTCGTGTATC ACAGCGGCAC GACCATGAAG CCGATTTTCC AGCTGGCGCG CAGCGTCGAG
CCGGAGAAGA AGCGCATCGT GTTCGCGGAA GGCGAGGAGG AGCGCGTGCT GCGCGCCATG
CAGATCATCG TCGACGAGAA GCTGGCCAAA CCGATCCTGA TCGGCCGCCC GGCGGTGATC
GAGCAGCGCA TTGCGCGCTA CGGTCTGCGG CTGGTCGCGG GGCAGGACTA CACGGTGGTG
AACACCGACC ACGACGAGCG TTACCGCGAC TTCTGGCAGG AGTATCACCG GATGATGTCG
CGCAAGGGCA TCAGCGCGCA GATGGCGAAG CTCGAAATGC GCCGCCGCAC CACGCTGATC
GGCGCGATGC TGGTGGAAAA GGGCGAGGCG GACGGCATGA TCTGCGGCAC GGTGTCGACC
ACGCACCGGC ATCTGCACTT CATCGATCAG GTGATCGGCA GGAAGGCGGG CGCGAAAGTG
TACGCGGCGA TGAACGCGCT GGTGTTGCCG AACCGCCAGA TCTTCCTGGT GGACACGCAC
GTGAACGTGG ATCCGACGCC GGAGCAACTG GCGGAAATCA CGATCATGGC GGCCGAAGAA
GTGCGCCGTT TCGGGATCGA GCCGAAGGTG GCGCTGCTGT CGCATTCGAA CTTCGGCACG
AGCAACGCGC CGACCGCGCA GAAGATGCGC GACACGCTGG CGATTTTGCG CGAGCGCGCG
CCGGACCTGC AGGTGGACGG CGAAATGCAC GGTGACATCG CACTCGACGC GAACCTGCGC
CGCGAAGTGA TGCCCGACTC GACGCTCGAA GGCGATGCGA ACCTGCTGGT GCTGCCGAAC
ATCGACGCGG CGAACATCTC GTACAACCTG CTGAAGACCG CCGCGGGCAA CAACATCGCG
ATCGGTCCGA TACTGCTGGG CGCAGCCAGG CCGGTGCACG TGCTGACGGC TTCGGCGACG
GTGCGCCGGA TCGTCAATAT GACGGCGTTG CTGGTGGCGG ATGTGATCGC GGCGCGTTAA
|
|---|
| Protein sequence | MPSNVYSNLP FEARLMSTPV NSKLREAALD YHEFPTPGKI AIAPTKQMIN QRDLALAYSP
GVAFACEEIV ENPLNAARFT ARSNLVGVVT NGTAVLGLGN IGPLASKPVM EGKAVLFKKF
AGIDVFDIEL NESDPHKLVD VIAALEPTFG GINLEDIKAP DCFIVERECR KRMKIPVFHD
DQHGTAIVVA AAITNGLKVV GKDIREVKLV SSGAGAAALA CLDLLVDIGL PLENITVTDL
AGVVYKGRVE LMDPDKERFA RETDARTLAE AIGGADVFLG LSAGGVLKQD MVKQMADKPL
ILALANPTPE ILPELALEVR PDAVLCTGRT DYPNQVNNVL VFPFLFRGAL DAGATTVTRE
MEIAAVNAIA ELARQEQSDI VATAYGIQDL SFGPEYLIPK PFDPRLIVKV APAVAQAAMD
SGVAERPIED MDAYEQHLQQ FVYHSGTTMK PIFQLARSVE PEKKRIVFAE GEEERVLRAM
QIIVDEKLAK PILIGRPAVI EQRIARYGLR LVAGQDYTVV NTDHDERYRD FWQEYHRMMS
RKGISAQMAK LEMRRRTTLI GAMLVEKGEA DGMICGTVST THRHLHFIDQ VIGRKAGAKV
YAAMNALVLP NRQIFLVDTH VNVDPTPEQL AEITIMAAEE VRRFGIEPKV ALLSHSNFGT
SNAPTAQKMR DTLAILRERA PDLQVDGEMH GDIALDANLR REVMPDSTLE GDANLLVLPN
IDAANISYNL LKTAAGNNIA IGPILLGAAR PVHVLTASAT VRRIVNMTAL LVADVIAAR
|
|---|
| |