| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0306 |
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| Symbol | rpoB |
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| ID | 4006112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4525937 |
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| End bp | 4530043 |
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| Gene Length | 4107 bp |
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| Protein Length | 1368 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637949331 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_560679 |
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| Protein GI | 91785473 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATATT CCTTCACCGA GAAGAAGCGT ATTCGCAAGA GTTTTGCGAA GCGCCCCATC
GTTCACCAAG TACCTTTCCT GCTGGCTACC CAGCTTGAAT CATTCAGCAC GTTTCTGCAA
GCAGACACGT CGTCCACGCA ACGCAAGCCG GAAGGCCTGC AAGCTGCGTT TACCTCCGTT
TTTCCCATTG TTTCGCATAA CGGGTTCGCT CGTCTAGAGT TCGTCAGCTA CATGCTGTCG
CCGCCGGCAT TCAACATCAA GGAATGTCAG CAGCGCGGTT TGACCTATTG CTCGGCCCTG
CGCGCGAAAG TGCGTCTGGT GCTGCTCGAC AAGGAATCCC CGAGCAAGCC GGTCGTCAAG
GAAGTGAAGG AACAGGAAGT GTACATGGGC GAAATTCCGC TCATGACGCC GACGGGTTCG
TTCGTCATCA ACGGCACGGA ACGTGTGATC GTTTCGCAGC TGCACCGTTC GCCTGGCGTG
TTCTTCGAAC ACGACAAGGG CAAGACGCAC AGCTCGGGCA AGCTGCTGTT CTCGGCACGT
ATCATTCCTT ACCGCGGTTC GTGGCTCGAT TTTGAGTTCG ACCCGAAGGA TGTGCTGTAC
TTCCGCGTCG ACCGCCGCCG CAAGATGCCG GTCACGATCC TGCTGAAGGC AATCGGCCTC
ACGCCGGAAC AGATCCTCGC AAACTTCTTC GTGTTCGACA ATTTCACGCT GATGCCGGAA
GGCGCGCAGA TGGAATTCGT GCCGGAGCGT TTGCGTGGTG AAGTCGCGCG TTTCGACATC
ACGGACCGTG ACGGCAACGT GATCGTCCAG AAGGACAAGC GGATCAACGC CAAGCACATT
CGCGATCTCG ACAACGCCAA GACCAAGTTC ATCTCGGTCC CGGAAGACTA TTTGCTCGGC
CGCGTGCTGG CGAAGAACGT GGTCGACGGC GACACGGGTG AAGTCATCGC TAACGCGAAC
GACGAAATCA CGGAAACCGT GCTCGAGAAG CTGCGCGAGT CGAAGATCAA AGACATCCAG
ACGCTCTACA CGAACGATCT GGATCAAGGT CCGTACATCT CGTCGACACT GCGTATCGAC
GAAACCGCGG ACAAGATGGC CGCGCGCATT GCAATTTACC GCATGATGCG TCCGGGCGAG
CCGCCGACCG AAGAAGCGGT CGAGGCGCTA TTCAACCGTC TGTTCTACAG CGAAGACGCA
TACGACCTGT CCAAGGTGGG TCGTATGAAG TTCAATCGCC GTGTCGGCCG CGACGAAATC
GTCGGTCCGA TGACGCTGCA AGACGACGAT ATCCTCGCCA CGATCAAGAT CCTGGTCGAG
CTGCGTAACG GCAAGGGCGA AGTGGACGAC ATCGACCACT TGGGCAATCG TCGTGTGCGT
TGCGTCGGCG AACTGGCCGA AAACCAGTTC CGCGCCGGTC TCGTGCGTGT CGAACGTGCT
GTGAAGGAAC GCCTCGGCCA GGCCGAAAGC GAAAACCTGA TGCCGCACGA TCTGATCAAC
TCGAAGCCGA TTTCGTCGGC GATTCGCGAG TTCTTCGGTT CGTCGCAGCT GTCGCAGTTC
ATGGACCAAA CGAACCCGCT GTCGGAAATC ACCCACAAGC GCCGTGTTTC GGCTCTTGGC
CCGGGCGGTT TGACGCGTGA GCGCGCCGGC TTTGAAGTCC GTGACGTGCA TCCGACTCAC
TACGGTCGCG TGTGCCCGAT TGAAACGCCG GAAGGTCCGA ACATCGGCCT GATCAACTCG
CTCGCTCTGT ACGCGCACCT GAACGAATAC GGCTTCCTCG AAACGCCGTA TCGCAAGGTC
GTGGACAGCA AGGTGACCGA TCAGATCGAC TATCTGTCGG CGATCGAAGA AGGCCGTTAC
GTGATCGCTC AGGCGAACGC GGCGGTGGCG GAAGACGGCT CGCTGACCGA CGAACTGGTG
TCGTCGCGTG AAGCAGGCGA AACGCTGATG GTCACGCCGG ACCGCATCCA GTACATGGAC
GTGGCGCCGT CGCAGATCGT GTCGGTGGCA GCATCGCTGA TTCCGTTCCT CGAGCACGAT
GACGCGAACC GCGCGTTGAT GGGTTCGAAC ATGCAGCGTC AGGCTGTGCC GTGTCTGCGT
CCTGAAAAGG CCGTGGTCGG TACCGGTATC GAGCGCACGG TGGCAGTCGA CTCGGGTACG
ACGGTTCAGG CATTCCGCGG TGGCGTGGTG GACTACGTCG ACGCAGGCCG TATGGTGATC
CGCGTGAACG ATGACGAAGC CGTTGCTGGC GACGTCGGCG TGGACATCTA CAACCTGATC
AAGTACACGC GTTCGAACCA GAACACGAAC ATCAACCAGC GCCCGATCGT GAAGGTCGGC
GACATCGTGT CGCGTGGCGA CGTGCTGGCT GACGGCGCAT CCACCGACCT CGGCGAACTG
GCTCTCGGCC AGAACATGCT GGTCGCGTTC ATGCCGTGGA ACGGCTACAA CTTCGAAGAC
TCGATCCTGA TCTCTGAGAA GGTGGTTGCC GACGACCGTT ACACGTCGAT CCACATTGAA
GAACTGAACG TCGTGGCTCG CGATACGAAG CTCGGACCGG AAGAAATCAC GCGCGACATC
TCGAACCTGG CTGAAGTGCA ACTCGGCCGT CTCGACGAGT CGGGCATCGT CTACATCGGC
GCTGAAGTCG AAGCAGGCGA CGTGCTGGTC GGCAAGGTCA CGCCGAAGGG CGAAACCCAG
CTGACACCGG AAGAAAAGCT GCTGCGCGCG ATCTTCGGTG AGAAGGCTTC GGACGTGAAG
GACACGTCGC TGCGCGTGCC GTCGGGCATG AGCGGCACCG TGATCGACGT TCAAGTGTTC
ACGCGTGAAG GCATTCAGCG CGACAAGCGC GCGCAACAGA TCATCGACGA TGAACTGAAG
CGTTACCGCC TCGACCTGAA CGACCAGCTG CGTATCGTGG AAGGCGACGC GTTCCAGCGT
CTCGCACGTA TGCTGACCGG CAAGGTCGCG AACGGCGGTC CGAAGAAACT GGCGAAGGGC
ACGAAGATCG AACAGGCTTA CCTGGAAGAT CTGGATCACT ACCACTGGTT CGACATCCGC
CTCGCGGACG AAGAAGCAGC GGCACAGCTC GAAGCGATCA AGGACTCGAT CGAACAGAAG
CGTCACCAGT TCGATCTGGC GTTCGAAGAA AAGCGCAAGA AACTCACGCA AGGCGACGAA
CTGCCGCCGG GCGTGTTGAA GATGGTCAAG GTGTACCTGG CAGTCAAGCG CCGCCTGCAG
CCTGGCGACA AGATGGCCGG CCGTCACGGT AACAAGGGCG TGGTATCGAA GATCGTTCCG
ATCGAAGACA TGCCGTACAT GGCCGACGGC CGTCCGGCTG ACGTCGTTCT GAACCCGCTC
GGCGTGCCGT CGCGGATGAA CGTGGGTCAG GTTCTCGAAG TGCATCTGGG TTGGGCCGCG
AAGGGTCTCG GCTGGCGTAT CGGCGAAATG CTGCAGCGTC AGGCCAAGAT CGCTGAACTG
CGCGAATTCC TGACCAAGAT CTACAACGAG TCGGGCCGCG CTGAAGAGCT GGACAGCTTC
ACGGACGACG AAATCGTCGA ACTGGCGAAG AACCTGCGCG AAGGCGTGCC GTTCGCTACG
CCGGTGTTCG ACGGCGCGAC GGAAGAGGAA ATGTCGCGCG CGCTGGATCT CGCATTCCCG
GACGACATCG CGAAGAACCT CGGCATGACG CCGTCGAAGA ACCAGGTGCG TCTGTACGAC
GGCCGCACGG GCGAAATGTT CGAACGTACG GTGACGGTCG GCTACATGCA CTACCTGAAA
CTGCACCACC TGGTCGACGA CAAGATGCAC GCGCGTTCCA CGGGCCCGTA CTCGCTCGTG
ACGCAGCAGC CGTTGGGCGG TAAGGCGCAA TTCGGTGGCC AGCGTTTCGG TGAAATGGAA
GTGTGGGCGC TCGAAGCGTA CGGCGCATCG TACGTGCTGC AGGAAATGCT GACGGTGAAG
TCGGACGACG TGACAGGCCG GACCAAGGTT TATGAAAACC TGGTCAAGGG CGATCACGTG
ATCGACGCCG GCATGCCGGA ATCCTTCAAC GTGTTGGTGA AGGAAATCCG CTCGCTCGGT
ATCGATATCG ACCTCGACCG CAACTAA
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| Protein sequence | MQYSFTEKKR IRKSFAKRPI VHQVPFLLAT QLESFSTFLQ ADTSSTQRKP EGLQAAFTSV
FPIVSHNGFA RLEFVSYMLS PPAFNIKECQ QRGLTYCSAL RAKVRLVLLD KESPSKPVVK
EVKEQEVYMG EIPLMTPTGS FVINGTERVI VSQLHRSPGV FFEHDKGKTH SSGKLLFSAR
IIPYRGSWLD FEFDPKDVLY FRVDRRRKMP VTILLKAIGL TPEQILANFF VFDNFTLMPE
GAQMEFVPER LRGEVARFDI TDRDGNVIVQ KDKRINAKHI RDLDNAKTKF ISVPEDYLLG
RVLAKNVVDG DTGEVIANAN DEITETVLEK LRESKIKDIQ TLYTNDLDQG PYISSTLRID
ETADKMAARI AIYRMMRPGE PPTEEAVEAL FNRLFYSEDA YDLSKVGRMK FNRRVGRDEI
VGPMTLQDDD ILATIKILVE LRNGKGEVDD IDHLGNRRVR CVGELAENQF RAGLVRVERA
VKERLGQAES ENLMPHDLIN SKPISSAIRE FFGSSQLSQF MDQTNPLSEI THKRRVSALG
PGGLTRERAG FEVRDVHPTH YGRVCPIETP EGPNIGLINS LALYAHLNEY GFLETPYRKV
VDSKVTDQID YLSAIEEGRY VIAQANAAVA EDGSLTDELV SSREAGETLM VTPDRIQYMD
VAPSQIVSVA ASLIPFLEHD DANRALMGSN MQRQAVPCLR PEKAVVGTGI ERTVAVDSGT
TVQAFRGGVV DYVDAGRMVI RVNDDEAVAG DVGVDIYNLI KYTRSNQNTN INQRPIVKVG
DIVSRGDVLA DGASTDLGEL ALGQNMLVAF MPWNGYNFED SILISEKVVA DDRYTSIHIE
ELNVVARDTK LGPEEITRDI SNLAEVQLGR LDESGIVYIG AEVEAGDVLV GKVTPKGETQ
LTPEEKLLRA IFGEKASDVK DTSLRVPSGM SGTVIDVQVF TREGIQRDKR AQQIIDDELK
RYRLDLNDQL RIVEGDAFQR LARMLTGKVA NGGPKKLAKG TKIEQAYLED LDHYHWFDIR
LADEEAAAQL EAIKDSIEQK RHQFDLAFEE KRKKLTQGDE LPPGVLKMVK VYLAVKRRLQ
PGDKMAGRHG NKGVVSKIVP IEDMPYMADG RPADVVLNPL GVPSRMNVGQ VLEVHLGWAA
KGLGWRIGEM LQRQAKIAEL REFLTKIYNE SGRAEELDSF TDDEIVELAK NLREGVPFAT
PVFDGATEEE MSRALDLAFP DDIAKNLGMT PSKNQVRLYD GRTGEMFERT VTVGYMHYLK
LHHLVDDKMH ARSTGPYSLV TQQPLGGKAQ FGGQRFGEME VWALEAYGAS YVLQEMLTVK
SDDVTGRTKV YENLVKGDHV IDAGMPESFN VLVKEIRSLG IDIDLDRN
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