| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0280 |
|---|
| Symbol | |
|---|
| ID | 4006147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 4562625 |
|---|
| End bp | 4563314 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637949366 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_560705 |
|---|
| Protein GI | 91785499 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00188137 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGATC CAGTCAGGGT CGTGGTCGCT GACGACCATC CGGTTATTCT GTTCGGCGCC
GAGCAGGCTT TGCTCAAGTT TCCTGGTCTG CAAGTGGTCG CCCGTGCACG ACAGTCAACC
GAATTGATCA AGGTGCTGCA AACCATTGCC TGCGACGTGC TCGTCACGGA TCTGGCAATG
CCGGGCGGCC AATATGGCGA CGGCTTGCCG CTGATCGGCT ATCTACGCCG CAATTTCCCC
AACCTTCCCA TCGTCGTATT GACGATGCTC GAGAACGCCG CGTTGCTCAA GCGGCTGAGC
GAACTCGGCG TAACGTCGGT CGTCAACAAG TCGGACGATC TGAGCCATAT CGGGCTCGCG
GTGCAGCACG TCAGCCGCAA CCTCGAATAC ATGAGCCCGT CGGTCAAGGC GTCGCTAGAT
GCATTGCGCA TGAACGCCGG CGGCAAGAAC GACGAAGTCA TGTTGTCCAA ACGTGAGCTG
GAAGTGGTGC GCCTGTTCGT GTCCGGCATG ACGATCAAGG AAATCTCGGA GCAACTCAAC
CGCAGCATCA AAACGATCAG CACGCAGAAG AACACGGCCA TGCGCAAACT CGGCATCGAG
CGGGATTCCG AGTTGTTCCA GTACGCGCAG AGCAACGGCT TGCTGAACCT GTCGTCGCAT
TCAACGGACG CAACCGGCGG CGTGTCTTAA
|
|---|
| Protein sequence | MQDPVRVVVA DDHPVILFGA EQALLKFPGL QVVARARQST ELIKVLQTIA CDVLVTDLAM
PGGQYGDGLP LIGYLRRNFP NLPIVVLTML ENAALLKRLS ELGVTSVVNK SDDLSHIGLA
VQHVSRNLEY MSPSVKASLD ALRMNAGGKN DEVMLSKREL EVVRLFVSGM TIKEISEQLN
RSIKTISTQK NTAMRKLGIE RDSELFQYAQ SNGLLNLSSH STDATGGVS
|
|---|
| |