| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5529 |
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| Symbol | |
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| ID | 4016488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | - |
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| Start bp | 281046 |
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| End bp | 282719 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637945146 |
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| Product | phage integrase |
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| Protein accession | YP_552278 |
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| Protein GI | 91791328 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.95616 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGTAA CAGCCGGTTC GAGCGACAGC GACGCATTGC CCAATGCCGC CGCGCTGGCG
GCGCTGCGCG CCTGGTATGA GGGCATAGAC TCCCGCACGG CTGTCGCGCG CTACCTGGGC
GAGCGGCGCG TCACGGATGA GTCCTCCCGA GGCCTGCTGG GCCGCCTGCG CCGCCAGGTG
GCGGACTTTG CGCGTGGCCG CCATCGCGCT GATCTCGCCG CGCTCTTCGA GCGTGCGCAC
GCACGCGGCT CCAAACGCGC GATCACCATC GCCCGCGCGC TGGACACGAT CGCATCGCTG
CCTGTGCCCC AGCCACTGAT CGGAGACGAC CTCGAACGCT GGCTTCGGCC CCGCTCGGCT
GCGGCGCTGC GTGCGGCTGG GATCAAAACG CTCGCCGACC TGACCGTGCG CGTGCCGCGT
CGGCGACGTT GGTGGGTCAC CGTGCCCGGC CTCGGTGCCA CGGGGGCCCG CCAGATCGAG
GCGTTCTTTG CCGCCCATCC GGATCTCACG CAACGAGCAC GAGCGCTCGT GGCCGCCGCG
CCACCGAAAG ACCTGTCACC GTGGGAGAAC CTCGTCGTGC CCGAGGACGT CGACGGCTCG
CGCGGCACCT TGCGCGCACC GCGTTCGGCC TGCGCGATGC GCGCCGACAA CGACTACCAG
GCCGTGCAAG CCTGGCTGTC GCTGCACGAG TCACCTGCCA CACAGCGCAA GTACCGCAAG
GAGGCCGAGC GCCTGGTCCT GTGGGCCATC GTCGAGCGCG GCTGCGCGCT GTCGTCGCTG
GCCACGGAGG ACGCCGTCGC CTATCGGGCG TTCCTGCGCC GCCCCACCCC TCGCTCGCGC
TGGGTGGGGC CGCCGCGACC GCGCTCCTCA CCCGAGTGGC GACCCTTCGC CGGCGGACTG
TCGGCGCGCT CGGCCGCGCA CGGGCTGTCA GTGCTCAGCG CCATGTTCCG CTGGCTGATC
GAACAACGAT ACGTTCTCGC GAACCCGTTC TCGGGCATCA AGGTGCGCGG CGTGCAGCCC
GCTGGGATGG ACACTTCCCG GTCGTTCTCG GACGCCGAGT GGGCGTTGCT GCGCACGGTG
GCCGACGGGC TGGAGTGGTC GTACGGCTGG CAGCCGGCCG CCGCGCAGCG GCTGCGCTTC
GTGCTGGACT TTGCGTACGC CACCGGGCTG CGAGCCAGCG AACTGGTCCA CGCAACCCTC
GGCGCCATCG AGGTCGACCA CGAAGAGCGC TGGCTGCACG TTGTCGGCAA GGGCCACCGA
GCTGGCCGGG TGACGCTGCC GCCGCTGGCA CGGTCCGCCC TGGATCGTTA CCTCGTGCAG
CGGGGCCTGC CAACTACGCC GCAAAAATGG AGTCCAGACA TCCCGCTGAT AGGCAATATC
GGCGGCGAAG CCGGCATCAA CCGAGCCCGT CTGTGGGTTG TCATGAAGCG CTTCTTCGCC
ACTGTCGCCG ACATCCTTGT CGAGGACAAC CCGACCTTGG CCGCAAAGCT GCGCCGGGCA
ACCCCGCACT GGATGCGGCA CACCCACGCC TCTCACGCGC TACAAGGTGG CGCAGAACTC
ACCGCCGTAC GCGACAACTT GCGGCACTCC TCCATCGCGA CCACCTCGAT TTACCTGCAC
AGCGATGAGG TCAAGCGGGC CAGGCAGATG GATGCGGCGT TCGCGGTCCG GTGA
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| Protein sequence | MSVTAGSSDS DALPNAAALA ALRAWYEGID SRTAVARYLG ERRVTDESSR GLLGRLRRQV
ADFARGRHRA DLAALFERAH ARGSKRAITI ARALDTIASL PVPQPLIGDD LERWLRPRSA
AALRAAGIKT LADLTVRVPR RRRWWVTVPG LGATGARQIE AFFAAHPDLT QRARALVAAA
PPKDLSPWEN LVVPEDVDGS RGTLRAPRSA CAMRADNDYQ AVQAWLSLHE SPATQRKYRK
EAERLVLWAI VERGCALSSL ATEDAVAYRA FLRRPTPRSR WVGPPRPRSS PEWRPFAGGL
SARSAAHGLS VLSAMFRWLI EQRYVLANPF SGIKVRGVQP AGMDTSRSFS DAEWALLRTV
ADGLEWSYGW QPAAAQRLRF VLDFAYATGL RASELVHATL GAIEVDHEER WLHVVGKGHR
AGRVTLPPLA RSALDRYLVQ RGLPTTPQKW SPDIPLIGNI GGEAGINRAR LWVVMKRFFA
TVADILVEDN PTLAAKLRRA TPHWMRHTHA SHALQGGAEL TAVRDNLRHS SIATTSIYLH
SDEVKRARQM DAAFAVR
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