Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5440 |
Symbol | |
ID | 4016399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007950 |
Strand | - |
Start bp | 190584 |
End bp | 192440 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637945060 |
Product | hypothetical protein |
Protein accession | YP_552192 |
Protein GI | 91791242 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.135644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.335438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATTTT TCTCTAAGCT CCGTTCGCGG CTGACGGGCT GTCTGGATCA TGCGTCGGCA CCGTGTTGGG CTGCTGTCGC CGTTCCCCTT TTGTTTGCGC TGGCTTCCGT ATTTGTGATC GGCCAGGATG CGAACTGGGA TCTGCTTAAC TATCACCTCT ATAACGCATA TGCGCTGCTC AATGGCCGCG TCGGGATTGA CCTAGCACCA GCCGCTATGC AGAGCTATTT CAATCCGGTG CTGGATCTGC CGTATTTTCT GATGATTCAG CACTGGCCGC CTCGTGCAAT AGCCTTCGCG ATGGGCTTGT TTCACGGCCT TAATTTTGTG TTTTTGCTTC TGATTGTGAA GCCTTTTGTT GAGCGTGCGA AACACCCCAA CGCGACGGTG ATTCTGCTCG CGCTGGCCGG GTGCCTGAGT GCTGTTTTTG TATCGGAACT TGGAAACACC ATGGGCGACA ACACTTCATC GGTGTTTGTG CTGGCAGGTG TGGCGGTCGC TGTGACCCGA TGGGGTGATG TTGTACGTGC GCGCGGACAC TACCTGCTGT GGATCATGTT GGCGGGATTG CTGATAGGTA TGGGCGCCGG CGCAAAGCTC ACAAACGCGG TTTATGCGGT GGCCGGCGCC TTGGCACTTC TGCTGGCCTG TCCCGGCGGC GCAGTTCATC GGTTGCGCGT CGCATCGGCA TTCAGCGCGG GCGTTGTGCT GGGTATCGCT TTGACCGGGG GCTACTGGTT TCTCATGCTC TGGGAGCTCT ACGGCAATCC GCTGTTCCCG CAGTTCAATA CCTATTTCCA GTCGGACATG GCTGGCTCGA TCGGTGTGGG CGACACTCGC TGGCGGCCGA AGGGTGTAGC TGAAGCGCTT TTTTTCCCAT TTATATTTGC GCTGAATCCA GCGCGGGTTG GTGAGTCGGC GCTTTATCAG ATTGCACTGC CTGTGCTGTA CTCATTGTTC GCGCTCTGGG CCATCGCAGC AATTCGTACC CGATTTTTCA GCTTATCACC AGCCCGGAAT GCTTATGTTT TCCCTCTTGA AGAACCCTCG AGGGCACATT TTCTGCTGGC ATTTGCTGCT ACAAGTTACC TGACTTGGCT CGGCATTTTC AGCATTCACC GCTACCTGGT GCCGCTGGAA ATGATTGCGC CGTTGGCAAT CTGGCTTTTG TTGCATCGGC TCTTCAAGCC AGCTTTGGCA CAATCGCTTG GCAAAAAGGT ACTGCTTTCC TCGGTGATTG TTGTATTGCT ATTCCGGACA ACATGGGGCA ATGTTGGCTT TGGCGAAACC GCTTTCCGGG TTGAGCTGCC GCCGCTGGCT CAACCGGAAA AAACTGCTGT CATGATATTG CAGGGCGGTA AGCATGCCTG GTTGATCCCG TTTTTCCCGC CTGAAATCGA AGTCGCCTCG CTGGCAAGTT TCCCCGAGTC GCCGAAATTT GTGTCCCAGG CCATGCGGAT GATCGACAGC CGGTCAGAGA ATGCCTATGT TATTTTCGAA GCAAGCAAGG ACACACAGCC TGCACAAATC GCAAAAATCA ATCGCGTTCT TGCCAGTATG GGTGTGGGCA AGAGCGGTTT CGGCTGCGAT GTTGTACGTT GGGGTCTCAA GCGAAATTCC CGCCTGAACG CCAAGATGTC CGACAGCAGC AACGGCGCGT ACTGCGGTGT CGTGATGGAT TCCGCAGCGC GGCGCGACCT GGCTGAGGAG GACAAGGCCA TTGCGCGCGC CAGTGATGAA CTTGCAAAAA CACGTTACGG CTTGCGCGTC GATCTGGCAT CTTGTGTGAC GTACCGTGCT TGGGTGGGCA ACCACCAGGA CGGCTACCAG TACTGCCGTA TTTCCCGCCA GTCGTGA
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Protein sequence | MGFFSKLRSR LTGCLDHASA PCWAAVAVPL LFALASVFVI GQDANWDLLN YHLYNAYALL NGRVGIDLAP AAMQSYFNPV LDLPYFLMIQ HWPPRAIAFA MGLFHGLNFV FLLLIVKPFV ERAKHPNATV ILLALAGCLS AVFVSELGNT MGDNTSSVFV LAGVAVAVTR WGDVVRARGH YLLWIMLAGL LIGMGAGAKL TNAVYAVAGA LALLLACPGG AVHRLRVASA FSAGVVLGIA LTGGYWFLML WELYGNPLFP QFNTYFQSDM AGSIGVGDTR WRPKGVAEAL FFPFIFALNP ARVGESALYQ IALPVLYSLF ALWAIAAIRT RFFSLSPARN AYVFPLEEPS RAHFLLAFAA TSYLTWLGIF SIHRYLVPLE MIAPLAIWLL LHRLFKPALA QSLGKKVLLS SVIVVLLFRT TWGNVGFGET AFRVELPPLA QPEKTAVMIL QGGKHAWLIP FFPPEIEVAS LASFPESPKF VSQAMRMIDS RSENAYVIFE ASKDTQPAQI AKINRVLASM GVGKSGFGCD VVRWGLKRNS RLNAKMSDSS NGAYCGVVMD SAARRDLAEE DKAIARASDE LAKTRYGLRV DLASCVTYRA WVGNHQDGYQ YCRISRQS
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