Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5298 |
Symbol | |
ID | 4016257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007950 |
Strand | + |
Start bp | 52000 |
End bp | 52443 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637944923 |
Product | phenylacetic acid degradation-related protein |
Protein accession | YP_552055 |
Protein GI | 91791105 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.52092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCGC CGGAACCGGC TCCATCGGCC AGCTATTTCC ACCGGCCGTT TCAGCAACTG GTGGGGTACG ACATCCTGCA CAACGAACGC GGCCTGTATT TCCGGCTGCC GATCCGGCGT GACCACCTCA ACCCCCACGG CGTGCTGCAC GGCGGTGTGC CCCTGACCCT GCTCGACGCA GTTGGCGGCA GGACGCTGAT CGACCGACGG ATTCCGGGCA GCGATCAGCG CATCCTGTCA TCCGTCACCG TCACGCTCAC CGTGGATTTC ATGCGTGCGA TCGGCAGCGG CGTCCTGTTT GCATCGGCCA CGCCCGACCA CATCGGCAAG ACGCTGGCCT ACGTATCGAT GAAGGTGACG CTCGACGACC TGGATGGCGA CATCGTGTCG CACGGCATCG GCACCTACCG CATCTACACC AAGTCGCTGG TCAAGCACGT GTGA
|
Protein sequence | MNAPEPAPSA SYFHRPFQQL VGYDILHNER GLYFRLPIRR DHLNPHGVLH GGVPLTLLDA VGGRTLIDRR IPGSDQRILS SVTVTLTVDF MRAIGSGVLF ASATPDHIGK TLAYVSMKVT LDDLDGDIVS HGIGTYRIYT KSLVKHV
|
| |