Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5296 |
Symbol | |
ID | 4016255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007950 |
Strand | + |
Start bp | 50265 |
End bp | 51128 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637944921 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_552053 |
Protein GI | 91791103 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.913032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCAG ACTCTACCTT CGGCTTCGAC GACGAAGCCC TCGCCAACCA AGCCACGGTT TACCAGCCGG GTCTATTCAA GGACAAGGTC GTGATGGTCT CTGGCGCCGG CAGCGGCATC GGCAAGGGCA TCGCCTTCCT GTATGCGCGC CTGGGCGCCA GGCTGGTTAT CTGCGGACGT GACGCCGCCA AGCTGGCGTC TTGCGCTCAG TGGCTGCGCA AACTGGGCAG TCCGGACGTG CTGGTGCAGC CCATGACCAT CCGCGAGCCC GAGCAGGTGG CGCAGTTGAT GGACGCGGCG TGGCAACACT TCGGGCGCGT CGACGTGCTG GTCAACAATG CCGGCGGACA GTACCCTCAG CGGGCGCTGG ACTTCACGGT CAAAGGCTGG AAGGCCGTGA TCGACACCAA CCTCAACGGC ACCTGGTACA TGATGCACGC CATCGCCCGT CGCTGGAAAG ACACGGGCGC AGCGGGCAAC ATCGTCAACA TCGTGGCCGT CACCCAGCGC GGCATGCCGG GCGTGGCGCA CACTTGCGCC GCGCGCGCGG CGGTCACCTA TCTGTCCAAG ACCGTCGCGG TCGAATGGGC CGAGTACGGC ATTCGCATCA ACTGCATCGC CCCCGGCGTC ATCGAGAGCA CGGGTTTTCG CCAGTACTCG GACGAGGCGG TCAAGGCCTT CTCGGTCGCC AACCCGATGA AGCACGTGGG TGACGTGCAG GACATTGCCG AAGCGGCGGT CTACCTGAGC GCGCCCAGCG GCAAATTCAT CACCGGCGAG CTGCTCACGG TGGACGGTGG CGGCGTACTC TGGGGCGAAG CCTGGACCAT TCCAAAACCT GATTACTTCA AGGTGACCCC ATGA
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Protein sequence | MTADSTFGFD DEALANQATV YQPGLFKDKV VMVSGAGSGI GKGIAFLYAR LGARLVICGR DAAKLASCAQ WLRKLGSPDV LVQPMTIREP EQVAQLMDAA WQHFGRVDVL VNNAGGQYPQ RALDFTVKGW KAVIDTNLNG TWYMMHAIAR RWKDTGAAGN IVNIVAVTQR GMPGVAHTCA ARAAVTYLSK TVAVEWAEYG IRINCIAPGV IESTGFRQYS DEAVKAFSVA NPMKHVGDVQ DIAEAAVYLS APSGKFITGE LLTVDGGGVL WGEAWTIPKP DYFKVTP
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