| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5243 |
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| Symbol | |
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| ID | 4015970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 352944 |
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| End bp | 354500 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637944870 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_552002 |
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| Protein GI | 91791051 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.62369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGACAC TTGCTAAATT ACCGGCATCA ATGGCACCCA CTGCCGTAAA GCCTATATCC
GCATCGTCAG ATCTGAACAA ACTGGTCTAT TTTGATCGGG AAGACGGTCG GCTTCTGGTG
TCGAAGGATC ACTTCTTCAA CGCGACGGTT CGTAGCTACA CCGAGCGCAT AAAGGGCGAG
TGCGCCAAGA GTGGTCTTCC GCCTCCGGTG GTACAGCAGG TAGCGATGGA CGTCATTGCG
AAGATGCATC ACGACAATTC GCACGCGGAT GAGTTCGTCG CGCAAGCAAG CGAGATGCAG
AAGGCTGCAA AGACTGTATT TAAAAAGGCC GTGGAGCGCC GGGCATCGGA TATTCACATT
CGTGTATTCA ACAAAGGTGG CACGAAGGTA TTTTTCAGGA TTCACAACGA TTTGCATCTT
GTGCAAGAAG ACACTGCGAC TTGGGGACAC CTCATGTGCT CCGCTATTTA CACGTCGATG
TGCGACGTCG CAGATGCAAC ATTTGACGTG AACAATCGTC AAGATGCACG TATTTCTGGG
CGAGACAAGG TTCCCCCGGG CCTTGACGGA ATTCGGGTGG CAACGACACC CCAGGTTGAT
GGCAATGTCA TGGTGCTTCG CCTGCTCTAT AACGACACGG ACAAGTCAAC CGATATTTGC
GCTCTGGGAT ATGAACCAAG CCAAAAGGCC CAGGTTGACT CCATGAAGCG CAGGCCCACG
GGGATCAACA TTATTTCTGG CCCAACTGGA TCGGGCAAGT CCACAACCCT TCAGCGCACA
CTTCTGTCAA TCCACTCGGA ATGCAAGGGC TCTAAGCACA TCATCACGGT AGAAGACCCG
CCTGAATACC CGATGCCAGG TATCGTGCAG ACGCCGGTTG CGAATGCTGA AACCGAAGAA
GACCGCTCAA ATGCGTTCCA GGCCGCCATC AAGGCGACGA TGCGGCTTGA TCCGAACATC
ATCATGATTG GCGAGATGCG CGACACGCCC TCAGTACAAC TTGCCGTGAG GGCGGCAATG
ACCGGCCATC AGGTCTGGTC AACCGTACAC GCCAACAATG CCTTTGCCAT CATTGACCGT
ATGGTGGACT TAGGGGTGTC GTTGAACATC ATGGCGGATC CGTCCATAGT CACCGGAATG
ATTTGTCAGA GGCTTTTGAA AGTCCTCTGT CCTCATTGCA AGCGGCCGTT GCGAGACGTC
ATCGATCACT TTTCCCACGA GGACCAGATG CGCGTGATGG GGTCGATCGA CATGGCAAAT
GCCCATGTCG CTGGACTCGG TTGTGAGCAT TGTTCTGGGA GTGGTGTTGC TGGGCGCACA
GTGGTCGCTG AAGTCGTCGT GCCTGACCAA AAAATCATGG ATTTCATTCG CAAGGGCGAT
CGGCATCTCG CTATCAACTA TTGGCGCGGC ACCGGTGGCA GCTCAATGCT GGAGCAGGCG
ATTGTCAAGA TCAACAGGGG CATTGTTGAC CCGTTTCAGG CTGAGGAGGA GGTTGGACCG
CTGAATCTCC TCCCGGAGCC GGCGTTAGCC CAAGAGGGTG CATCAAATGA ATCTTGA
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| Protein sequence | MLTLAKLPAS MAPTAVKPIS ASSDLNKLVY FDREDGRLLV SKDHFFNATV RSYTERIKGE
CAKSGLPPPV VQQVAMDVIA KMHHDNSHAD EFVAQASEMQ KAAKTVFKKA VERRASDIHI
RVFNKGGTKV FFRIHNDLHL VQEDTATWGH LMCSAIYTSM CDVADATFDV NNRQDARISG
RDKVPPGLDG IRVATTPQVD GNVMVLRLLY NDTDKSTDIC ALGYEPSQKA QVDSMKRRPT
GINIISGPTG SGKSTTLQRT LLSIHSECKG SKHIITVEDP PEYPMPGIVQ TPVANAETEE
DRSNAFQAAI KATMRLDPNI IMIGEMRDTP SVQLAVRAAM TGHQVWSTVH ANNAFAIIDR
MVDLGVSLNI MADPSIVTGM ICQRLLKVLC PHCKRPLRDV IDHFSHEDQM RVMGSIDMAN
AHVAGLGCEH CSGSGVAGRT VVAEVVVPDQ KIMDFIRKGD RHLAINYWRG TGGSSMLEQA
IVKINRGIVD PFQAEEEVGP LNLLPEPALA QEGASNES
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