Gene Bpro_5077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5077 
Symbol 
ID4016116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007949 
Strand
Start bp188354 
End bp190156 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content57% 
IMG OID637944714 
ProductUvrD/REP helicase 
Protein accessionYP_551846 
Protein GI91790895 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.935976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.623065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAC CCGCGCGGCC TTTTTTTTGC GCGTTTATGG CCTTCACACC TACCCAACAA 
GAAGCGATTG ACCACGACGG CAACCTGATG ATCGTCGCCG GCCCAGGCTC TGGCAAAACT
ACGACCTCCG TGGCCAAGGC TCGCCGGATT CTGAGCGACC CGCGCCGCTC CCTCATCATG
GTCACCTTCA CCAAGGAAGG TGCCGAGGAA ATGCGAAAAC GCCTTGAGAA GGCACAAGTG
GGCTCAGGTC AGCCCCCTAT CGCAAAGCAC CGCCTGCGCG TTGGTACTTT TCACAGCATT
GCCCTCCAGC ACTTGTTTGA ACATCGCACG CACGAGAAGG TGCTGGGCCC AGCTCAACAA
GGGATTCTGC TCAATGAATC CTTGAGTCCG TTTTCCAGTG ATATGGAATT GGTGAAGGAC
ATCCGAAAGG AATTCGAGTC CTACATGTAC GCCATTGATA GGGAGGCCCA TGAACTCAGT
GGCCCTGCGG CCAGGGTGGT GAGTCGGTAC ATGGAGCGGC TACGCGCCAG TCGGGCTACG
GATCTGTACA CGGTCATGCG TGACTGCGCC CTATTCGCCG ACAACGGCAC CATTCCGCCT
ATGCGCTACA CCGACATGCT GGTGGACGAA GGACAGGACA CTGACGAACT GCAGAAAGTC
TGGATCTTCG CCCACGCACG CGCTGGAATC AATGTCACCA TCGTGGGGGA TGACGACCAA
TCAATCTATG AGTGGCGCCA CGCCTTGGGT TACAGCGGCA TGAAGTCCTT TATGGACACC
TTCGGGGCGA AGCGCATTGA GCTGGGCGAC AACTTCCGCT GCCGCGAGGA AATCCTGACC
CACGCTGTTT TGCTGGTCCA GAACAACCAG AATCGGCTTG CCAAGCACCT TGTTGCTCAG
CGTGGCCCGG GAGGGAAGAT AGCCTCGTAC CACACAGCCT CGCCTGTAAG CCAGTGCAAG
GAGTTGGCGG ACTTGATCAG CAGGACACCC AACGCGCACT CAAACGTAGC GGTGCTGGCT
AGGAAGAACA AATCCCTTAA TGACCTGGAA TTGTCGCTGA CAGAGCGTCA GGTTGCGTAC
GTCCGCCTGG GCAAATCGTT TTGGGACAAC CCTTGGGTTG CCACCTACCT GGGCTTGCTC
CAATCCCTTG TGGATGCCTC GCCAGTGGGG GTTTTTGGAT GCCTTGGGAC GCTGGGCCTG
GACGACGCTG TAAAAACCGA GCTGCTTCAG TCCATGCGTG GCAGAGCGGA GGACTTTCTT
GAGGCTCAGG TACCGGATCT CGACAGCGCA ACATCCACAG ATGCCGCTCT CATCAAGGAA
TTCGCCAAAT TCTGCAAATA CTGGCGTGAT CAGTTGCGAT CGCAAGCCGG CGGTAGTGTT
GACGAGGTGG TGCTTGATGT AGGCAAGTGG TTGGCTTCCA AGCAGCGTTC GAAGGGCATC
AAGGAAGTTA TCGAAGGAGC AGCAGCCACC CTCAAAATGC TTAAGGGCAC GATTTCAAGC
AGACTGAGCT TCATCGCCAG GAACAAAAAT AGCACGGAGA CCGGTCCAGT CACCCTCATG
ACCATGCACG CGTCCAAGGG CATGGAATTC GAGACCGTCC ACGTCATCGA CGCGGGTAAG
CCGGAGGATG GCTCCGACCT GGTGAATACC GAGGCAGAAC GCCGGCTTAT GTACGTGGCG
CTGACGCGCG CCAAGAATCG GTGTTTTGTC TGGTACAGCG GCGAACCCCA CCCAACCATC
CGTGAAGCCC AACTGCAGGT CTTGCACGAG TTTGACAAGT TACTTGAAAA GGTCAACTCC
TAA
 
Protein sequence
MAAPARPFFC AFMAFTPTQQ EAIDHDGNLM IVAGPGSGKT TTSVAKARRI LSDPRRSLIM 
VTFTKEGAEE MRKRLEKAQV GSGQPPIAKH RLRVGTFHSI ALQHLFEHRT HEKVLGPAQQ
GILLNESLSP FSSDMELVKD IRKEFESYMY AIDREAHELS GPAARVVSRY MERLRASRAT
DLYTVMRDCA LFADNGTIPP MRYTDMLVDE GQDTDELQKV WIFAHARAGI NVTIVGDDDQ
SIYEWRHALG YSGMKSFMDT FGAKRIELGD NFRCREEILT HAVLLVQNNQ NRLAKHLVAQ
RGPGGKIASY HTASPVSQCK ELADLISRTP NAHSNVAVLA RKNKSLNDLE LSLTERQVAY
VRLGKSFWDN PWVATYLGLL QSLVDASPVG VFGCLGTLGL DDAVKTELLQ SMRGRAEDFL
EAQVPDLDSA TSTDAALIKE FAKFCKYWRD QLRSQAGGSV DEVVLDVGKW LASKQRSKGI
KEVIEGAAAT LKMLKGTISS RLSFIARNKN STETGPVTLM TMHASKGMEF ETVHVIDAGK
PEDGSDLVNT EAERRLMYVA LTRAKNRCFV WYSGEPHPTI REAQLQVLHE FDKLLEKVNS