| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5060 |
|---|
| Symbol | |
|---|
| ID | 4016138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007949 |
|---|
| Strand | + |
|---|
| Start bp | 171664 |
|---|
| End bp | 172278 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637944698 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_551830 |
|---|
| Protein GI | 91790879 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.64626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCACCG ATGGAGTTTT GATGACTGAA AGAAAGCTGC CTACTAATTC TCTGCTTACC
CGTGCGAAAA GGGAGGCCAA GCAGAACACC ACCCCTGACA AGCCATACAC CCAGGCGCTG
GATGAGCAGG CGCAAATGGC TGGATACCCA GATTGGCGAA CGCTGGCCAT GGCCAATGGG
CTCCGCAATG CACACGAAGG CGATGACATC CCTCTCGACC CTGTGCTCCC ACCTAACTTC
GATCAAACGC CCAACGAGGA CCGTTCGGAA AAGGAACTGG ATAAGTGGTG GAACAAGCCT
TTCATCGTCT CCCGTAGTGA TGGATCATTT GAAGCAAGGG CCCTTAACGG CGGCGCCTGG
GACCGCTCGA CATATTTAGG GACTGCCGCC ACTGTGGAAG AGGCAAGGGC GCTTGCACGG
ATAAAGCAGA AGGAATGGAT CGAAATCACC TCCCAGCCGA TAGCCTGCAT GCGGGCAGAC
GGATTGGTCG ACCTGGTGAT CATGGCAACG CGTCCAGATT GGGAAAATAC AGTCTTGGCC
AGTGCGCTTC AGCCGGACGA AGTCAACGCT GTTCGGGATA AGCTGAAGGT TGGTGGCGGA
AGGGGACGAA AGTAG
|
|---|
| Protein sequence | MFTDGVLMTE RKLPTNSLLT RAKREAKQNT TPDKPYTQAL DEQAQMAGYP DWRTLAMANG
LRNAHEGDDI PLDPVLPPNF DQTPNEDRSE KELDKWWNKP FIVSRSDGSF EARALNGGAW
DRSTYLGTAA TVEEARALAR IKQKEWIEIT SQPIACMRAD GLVDLVIMAT RPDWENTVLA
SALQPDEVNA VRDKLKVGGG RGRK
|
|---|
| |