Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4962 |
Symbol | |
ID | 4016196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007949 |
Strand | + |
Start bp | 64368 |
End bp | 65831 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637944601 |
Product | hypothetical protein |
Protein accession | YP_551733 |
Protein GI | 91790782 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.160649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAC AGCTCCAACT GCCTCTCGAC GGCGGCAAAG AACCCAGCGC CCGGGAAGTC AACCGCCAGA TCTCCGCAGA ACTAAAGAGC GCCAAGCGCA GCGCCCAGGC CAAACGGGCA GGCACCGGTG CGGGTTTGAG CGTCCTGCAG CGCGCCCAGC AACGCCACAA AAAGAACCCC AAGGCGCAAC TGGCCATGTT CCTCGGGGAA TTCACCATTC GTGCCGGTAC CGGCCGTGCC CGCCCCATAT CCGAGCGCAC CCGCACCCAC TACGGCGACG AACTCATGCG CATGCTCGAT GAACTGCGCG AGATCCGGGC CGGAGTTCAG AACATCGGCG AAATCGGAAA AAGCCACGCC GTCAAACTCA TCAAACACTG GGGCAGTAAG GGCCAGGCCG CATCCACCAT CCAGAACAAG ATCAGCATCC TGCGCCGCTT CCTCACCTTC ATCGGGAAAG ACAGTGCCAT CCCCAAGGGA CAGGACCTGA AAACCTGGCT CAACCAGCAG GGCGTCACCG CACCCGTTAC CCGCCAGAAC ATCCCCACCG AAAGCAAGGC ATGGGATGAA AACCAGGTAG ACCTGCACAA GGTACTGACC GAGCTGCGCA AGGAAAGCGC CATCACCGCC ATGCAGTTGG AGGTACAGGC GGCATTCGGC CTGCGCATGA AGGAATCCCT GCAGCTCAAT CCCCAGGCGG CGGACTGCGG AACCTTCCTG CGCGTCGTAC ACGGCACCAA AGGCGGCTTG CCACGCGACG TTGACTTTGA AGACGACCCC GTCATGCGCG AGTGGCAGAG AGATGTACTC GAGCGGGCAA AACTCTACGC CCAGCGAAAT CGCAAGGGAA CTCTGTCCAT CCAGGGCAAG CGCCTCGACC AGAGCAAGGC CCACTTCTAC TATCAGTGCG GCAAGGTAGG TATCACCCGC AACCAACTCG GCGTCACCGC CCACGGCCTG CGCCACCAGT ACGCCGCCCG CCGGTATGCC CGACTGGCAG GGATGGGGGC GCCAGTGACC AGGAACGCCC CTCTGCACGT CACCGACGAG GTGCGCAGCG CCGATCTGGC CGCCCGGGAA CAGATCAGCC GCGAACTCGG CCACTTCCGC CCCGACATTA CCCAGGCTTA CACCGGCTCC CTGCCCATGA TGGAAAAGGG CCGCAAACAG CGTATCCGTG ACTGGGTCGA ACGCACAGAA GAGAACCCTG AATTCCAGAC CGCCATGAAA GACGCCGGCG TTGTCTCCGT CTGGATGGGG GGACGCTTTG CCATGGGTCT GGAGGCCGAA GCCAGCGAAA AATTCCGGCT CATCGTCCGG ACCGCCAGCT GCCAGCCCCT GGATGGGGAT GCCCGCTTCA TGCTCAAACA GCGCCTCATG GGCATGTACG ACCGCGCCAT CGACCTCAGC GAGCACTTTG AAGCCGGTTC GCCCGACGAC ACCTTTGAAC TCATGGTCCG TTGA
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Protein sequence | MTQQLQLPLD GGKEPSAREV NRQISAELKS AKRSAQAKRA GTGAGLSVLQ RAQQRHKKNP KAQLAMFLGE FTIRAGTGRA RPISERTRTH YGDELMRMLD ELREIRAGVQ NIGEIGKSHA VKLIKHWGSK GQAASTIQNK ISILRRFLTF IGKDSAIPKG QDLKTWLNQQ GVTAPVTRQN IPTESKAWDE NQVDLHKVLT ELRKESAITA MQLEVQAAFG LRMKESLQLN PQAADCGTFL RVVHGTKGGL PRDVDFEDDP VMREWQRDVL ERAKLYAQRN RKGTLSIQGK RLDQSKAHFY YQCGKVGITR NQLGVTAHGL RHQYAARRYA RLAGMGAPVT RNAPLHVTDE VRSADLAARE QISRELGHFR PDITQAYTGS LPMMEKGRKQ RIRDWVERTE ENPEFQTAMK DAGVVSVWMG GRFAMGLEAE ASEKFRLIVR TASCQPLDGD ARFMLKQRLM GMYDRAIDLS EHFEAGSPDD TFELMVR
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