| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4943 |
|---|
| Symbol | |
|---|
| ID | 4015895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007949 |
|---|
| Strand | - |
|---|
| Start bp | 48966 |
|---|
| End bp | 50282 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637944583 |
|---|
| Product | capsule polysaccharide biosynthesis |
|---|
| Protein accession | YP_551715 |
|---|
| Protein GI | 91790764 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3562] Capsule polysaccharide export protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTCG TTTCGCTAAA AGCTGGGAAT GAGCCGCGCG CGGAAAATCA ATTTTCGGCA
CATCCCGACG AAGGCCGTCG CCACGTACCG TACAACCCGG CTCAGATTCA GCTCGCCAAG
TCCCGAAAAG TCTTGCTGCT GCAGGGGCCG GTGGGGCCTT TTTACGACCG GCTGACCCGC
TGGCTGCACA CCTGTGGCGC TGAAGTCCAC CGTATTGCCC TCCAGGGTGG AGACCAGCAC
GACTGCAAGT TGCTCCAGCC TATCGCCTAC CGGGGTACGC TTGAGGGGTG GTCCGCCTTT
CTCGAAAGTC AGATTCACCG GTTGGGTATT GACTGCGTCG TGTTGTTTGG CCAATCGCGC
CGCTACCACG AAAAGGCCAG GGAGGTCGCG CGTGCTCAAG ACCTGCCTGT TGTGGTTCTG
GAAGAAGGCT ACTTTCGCCC AGGCTACTTG ACCATGGAGT TGGGCGGTGT CAATGGCTAT
TCCACAACGC TGCAGCGTTA CTGCTGGCAA CCCGTGGCAT TGGTGAACAG CGAAGGCCGT
GCCAAGCGGC GCCCGAATAA TCTTCTGCCC GACATATCGC CGCGGCATTT TCAAAAAATG
GCCTGGCATG CGGTTCAGCA TTACATGGCC TTGTACAAAT CGCGCGCAGA CTTCCCGCAC
TATCAGCACC ACCGCGGCGA CAACCCCTAC CAATATGCCG CTTATTGGCT GCACTCGTGG
CGACGCAAAT GGCTGCATCA GTCTGTGGAC CGCCGGTTTC AAGCCCGGTT GTTTCAGGGC
AGTCGGCACT ATTTCCTTGT GCCACTGCAG CACGATGGCG ACGCCCAAAT CACCCACCAC
AGCCCGTTCG CAGAAAACAC TGCCTTCATC ATCCGCGTCA TGCGCTCCTT TGCGTGGCGC
GCACCCAAAG ACTCCTGGCT GGTGTTTCGC CAACACCCTC ATTCCCGAGG GGGACCCGGG
CATGTGAGCC TCATTTCCAG CCTCGCGGCT GAACTGGGCA TCACGGGCCG TGTGCGCCAC
ATGGTAGAGG GCGACACGCC CGACCTGGCC CAGCGGTCCG CTGGTGTGGT GCTCATCAAT
AGCACCGTCG GCTTGCAGGC ACTGGAGCGG GGTGCCCCCC TCATGGCACT GGGCGAGGCA
CTTTACAAGC AGCCGCATCT CACCTTTTGG GGCGAGCTCG ATGAGTTTTG GCACCATGCC
CGCCCTGCTG ACAAAGTGGT CACTGCGGCA TTTCTGGCGC AAATGAAAAA CCTCACGCAA
GCCTCTGCCA GCGTCTATGC CTTAAGAGAC GAGCCCCTGC GTTGGGGTCA CCCTTGA
|
|---|
| Protein sequence | MSVVSLKAGN EPRAENQFSA HPDEGRRHVP YNPAQIQLAK SRKVLLLQGP VGPFYDRLTR
WLHTCGAEVH RIALQGGDQH DCKLLQPIAY RGTLEGWSAF LESQIHRLGI DCVVLFGQSR
RYHEKAREVA RAQDLPVVVL EEGYFRPGYL TMELGGVNGY STTLQRYCWQ PVALVNSEGR
AKRRPNNLLP DISPRHFQKM AWHAVQHYMA LYKSRADFPH YQHHRGDNPY QYAAYWLHSW
RRKWLHQSVD RRFQARLFQG SRHYFLVPLQ HDGDAQITHH SPFAENTAFI IRVMRSFAWR
APKDSWLVFR QHPHSRGGPG HVSLISSLAA ELGITGRVRH MVEGDTPDLA QRSAGVVLIN
STVGLQALER GAPLMALGEA LYKQPHLTFW GELDEFWHHA RPADKVVTAA FLAQMKNLTQ
ASASVYALRD EPLRWGHP
|
|---|
| |