| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4915 |
|---|
| Symbol | |
|---|
| ID | 4015952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007949 |
|---|
| Strand | + |
|---|
| Start bp | 9839 |
|---|
| End bp | 10534 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637944557 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_551689 |
|---|
| Protein GI | 91790738 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCAG CTCCTTGTTC TGTGGTGAGT AGCGCTTCGT TCACGCAAAG TACGGCATTG
AAAGAGATCC TGTACACCGA TCCCAGTGAG TTCCTTGACG GCATGATGGT CGGATGGGCT
AAGCGTGGCA TTCGGGCGAT TGCCATGATT GGGCCAGATC CGGTTTGTCA CGAAAAAAGG
GCGACTCTGC TCGTCCGTCC TGTGAGCTAT CGGACAGCAG CCGACATATT GGCAGCCAGT
GACGCTTATG GGGCTACCTG GAGTGATAGT GACGCTCCCG GTGTGGCCTG GGTTGATGCA
ACACGCAATG AACCCTGGCT GGTGCCATGG GTTGAAGCTG GATGCCTTGG CATCGTGCGT
GTGGGCATGG AGATGCCCGG AGACAAGCAG ATCGAGGTAT TCGCTGCCAG CTGGAATAAG
TTGAGCCGCC CGGTGGTGGC GGAGTTTGTT CTGGACTTAG TTGCAGTATG GCCTCAGATC
AAAAGGTATG TTTTACCGCC CTTGTCCGGA CTGACCGCTC AGCAGGTGAA GGTTCTGAAT
CTTTCACTCC ATGGCCTCTC TGCCCGCGAA TGTGCCGCGT CTCTGGGGGT GACGGAGCGC
ACGGTGAATT TCCATTTGGC TACCATTCAG GAAAAATTTG GTACCCAGAA TAAGCAGGAG
AGCATTTCCA AGGCGATCTG GCTTGGGGCA ATTTGA
|
|---|
| Protein sequence | MRSAPCSVVS SASFTQSTAL KEILYTDPSE FLDGMMVGWA KRGIRAIAMI GPDPVCHEKR
ATLLVRPVSY RTAADILAAS DAYGATWSDS DAPGVAWVDA TRNEPWLVPW VEAGCLGIVR
VGMEMPGDKQ IEVFAASWNK LSRPVVAEFV LDLVAVWPQI KRYVLPPLSG LTAQQVKVLN
LSLHGLSARE CAASLGVTER TVNFHLATIQ EKFGTQNKQE SISKAIWLGA I
|
|---|
| |