| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4827 |
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| Symbol | |
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| ID | 4012478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 5114083 |
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| End bp | 5116107 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637944470 |
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| Product | transketolase |
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| Protein accession | YP_551602 |
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| Protein GI | 91790650 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.827436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATT CCATTCGTGC GCTGGCCATG GATGCCGTGC AGCAGGCCAA CTCCGGCCAC
CCTGGCGCGC CCATGGGCAT GGCCGATATC GCCGTTGCCT TGTGGGGCCG CCACCTGAAG
CACAGCCCGC ACAATCCGCA GTGGTTTGAC CGCGACCGCT TCGTGCTGTC CAACGGCCAC
GGCTCCATGC TGCTCTATGC GCTGCTGCAC CTGACCGGCT ACAAGCTGCC GATGAGTGAG
CTGAAAAACT TCCGCCAGCT GCACAGCAAA ACCCCCGGCC ACCCCGAGCA CGGCTACACC
CCCGGCGTGG AAACCACCAC CGGCCCGCTG GGCCAGGGCC TGACCAATGC CGTGGGCATG
GCGCTGGCCG AAAAGCTGCT CGCCAAGGAG TTCAACCGTG ACGGCCACAG CGTGGTCGAC
CACCACACCT ATGTTTTCAT GGGCGATGGC TGCCTGATGG AAGGCATCAG CCATGAAGCT
GCCGCCCTCG CCGGCGCCTG GAAGCTGGGC AAGCTGATTG CCTTGTACGA CGACAACGGC
ATTTCGATTG ACGGCCCGGT CACCCCCTGG TTCATCGACA ACACGCCACT GCGCTTCGCC
GCCTACGGCT GGAACGTGAT CGGCCCCCTC GACGGGCACG ACGCGCAAGC CGTGTCGGCC
GCGATTGCTG AAGCAAAAGA GAGCACCGAC AAGCCCACGC TGATCGTTTG CAAAACCCAC
ATCGGCAAAG GCAGCCCCAA CCGTGCCAAC ACCGCCAAGG CCCATGGCGA GCCACTGGGC
GCCGAAGAAA TCAAGCTCAC GCGCGACGAA CTGAACTGGC CGCACACCCC GTTCGAAGTT
CCCAAGGAAA GCTACGACGC CTGGGACGCC AAGGCCGCCG GCCTGGCCGC AGAGGCGGCC
TGGGACGTGA AATTTACCGC CTACAAGGCC GCCCACCCGG AGTTGGCCGC GGAATTCACG
CGCCGCATGA AGGGCGAACT GCCCAAACGC TTTTCGCAGC TGGCCGTCGA TACGGTGATT
GGTGCGCACA CCCGGGCCGA AACCGTGGCG TCGCGCAAGG CCTCGCAGAT TGCGCTGGAG
TCCTTCACCG CCGGCCTGCC CGAGATGCTG GGCGGCTCGG CCGACCTGAC CGGCTCCAAC
CTCACCAACA CCAAGTCAAC GCCCAACCTG CGCTTTGACC CGAACGGCGA GGTGGTGCAG
ACCGAAGCGG CCAACGGCAG CCTGGTCGGT GGCCGTCACA TCAACTACGG CGTGCGCGAG
TTCGGCATGG CCGCCATCAT GAACGGCGTG GCGCTGCATG GCGGGTTCAT CCCTTACGGC
GGCACCTTCC TGACCTTCAG CGACTACAGC CGCAACGCCA TCCGCATGGC CGCGCTGATG
AAGCTGCGCG TGGTGCACGT GTTCACGCAC GACTCCATCG GCCTGGGCGA AGACGGCCCG
ACGCACCAGT CGATCGAGCA CGCCGCCAGC CTGCGCCTGA TTCCCAATCT CGACGTCTGG
CGTCCGGGTG ACACGGCTGA AACCGCCGTG GCCTGGGCCG TGGCGCTGCA AAACAAAAAC
AAGCCCACCG CCTTGTTGCT GAGCCGCCAG AACCTGCCGT ACGCGCCGAA GAACGACCTT
GGCGAGATCA GCAAGGGTGC TTACGTGCTG GCCGAGCCCG CCGAAGTGGG GCTGAACAAA
AAAGCCCAGG CCGTCATCAT TGCCACCGGC TCCGAAGTGC AGCTGGCGCT CAAGGCGCAG
GAGCTGCTGG CCGGCAAAAA GATCGCGGTT CGCGTGGTTT CCATGCCCAG TACCACCACG
TTTGACAAGC AAAGCACCGC GTACAAGACG TCCGTGCTGC CGGCCGGCAT TCCGCGCATT
GCGGTCGAGA TGGGCGTGAC CGACGGCTGG TGGAAATACG GCTGCGCCGC CGTGGTCGGC
ATCGACACCT ACGGCGAGTC GGCGCCCGCG GCGGCGCTGT TCAAGCACTT TGGCTTCACG
CCCGAGAACG TGGCCGACAC CGTGCGCAAG GTGTTGAAGA AATAA
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| Protein sequence | MANSIRALAM DAVQQANSGH PGAPMGMADI AVALWGRHLK HSPHNPQWFD RDRFVLSNGH
GSMLLYALLH LTGYKLPMSE LKNFRQLHSK TPGHPEHGYT PGVETTTGPL GQGLTNAVGM
ALAEKLLAKE FNRDGHSVVD HHTYVFMGDG CLMEGISHEA AALAGAWKLG KLIALYDDNG
ISIDGPVTPW FIDNTPLRFA AYGWNVIGPL DGHDAQAVSA AIAEAKESTD KPTLIVCKTH
IGKGSPNRAN TAKAHGEPLG AEEIKLTRDE LNWPHTPFEV PKESYDAWDA KAAGLAAEAA
WDVKFTAYKA AHPELAAEFT RRMKGELPKR FSQLAVDTVI GAHTRAETVA SRKASQIALE
SFTAGLPEML GGSADLTGSN LTNTKSTPNL RFDPNGEVVQ TEAANGSLVG GRHINYGVRE
FGMAAIMNGV ALHGGFIPYG GTFLTFSDYS RNAIRMAALM KLRVVHVFTH DSIGLGEDGP
THQSIEHAAS LRLIPNLDVW RPGDTAETAV AWAVALQNKN KPTALLLSRQ NLPYAPKNDL
GEISKGAYVL AEPAEVGLNK KAQAVIIATG SEVQLALKAQ ELLAGKKIAV RVVSMPSTTT
FDKQSTAYKT SVLPAGIPRI AVEMGVTDGW WKYGCAAVVG IDTYGESAPA AALFKHFGFT
PENVADTVRK VLKK
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